Transcript Information: S_Transcript_20512.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5671705371557
Replicate 22.553892038812
Replicate 32.6685630989133
Condition 2: 8 Hour
Replicate 13.0170970223596
Replicate 23.0932137990619
Replicate 33.2899057396756
Condition 3: 24 Hour
Replicate 14.1442061927494
Replicate 22.9149596882762
Replicate 32.1896951734345


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20512.p1 GENE.S_Transcript_20512~~S_Transcript_20512.p1 ORF type:internal len:311 (+),score=44.86,RVT_1|PF00078.23|8.1e-42 S_Transcript_20512:1-930(+)
TTTATCACCCTTGTCCCTAAAAAAGACAGGTCCTTTAAGGTTCGAGACTTTCGACCCATCAGCCTGGTCACTAGTGTCTACAAAGTGATCACTAAGCTCCTGGCGCTGCGGGTGGGGGCAGTTCTCTCTTCTACTATCTCTCCCTCCCAGAGTGCCTTTGTAGGGGGGCGGCAGATTCTTGATGCGGCTTTGGTGGCTAATGAGGTTGTGGACGATGCCAGGAGATCAGGGTTTCAGGGGGTGGTATTTAAACTCGACTTTGAGAAGGCTTATGATAGAGTCAGTTGGTCTTTTCTTGACAAGGTAATGGAAAGGAAGGGATTTGGTGTGAGGTGGCGGCGGTGGATTAGGGGTTGTTTCTCAAATGCATACTTCTCGGTCTTGGTGAATGGTGCTGCTAGGAGTTGGTTCCCTTCCTCTCGGGGGTTACGGCAAGGGGACCCCCTTTCCCCTTTTCTCTTCACATTGGTAGTGGACGTTCTCAGTAGGATGGTGGAAAGGGCGGTGGTCAGAGGGGTTGTTGGTGGCTTTCCAGTTGGGCGGGAGAATATCATGGTTTCCCATTTACAGTTTGCTGACGATACTATTTTGTTTCTGGATGCGAGCCTTTGGAGTTTTAAGAACATGTTGACTATCCTTCAAATTTTTGAGGTGATTTCAGGGATGCGGATTAATCTTGGGAAGTGTAGCGTGGCTGGGGTGCATGTAGACAACGAGGAGCTTGAGGCGTTCGCTGAGTTGGCAGGGTGTCAGATTCAGGGGTGGCCTATGTCATACTTAGGAATCCCTCTTGGAGGTAATCCAAGGGTTGTTTCTTTCTGGGATCCCGTGGTTGATCGGATAAGGAAGAGGTTGGATGGATGGAGGAGGGTTTATTATTCCTTTGGGGGTAGAATCACGTTGTTGCAGTCTTGTCTTTCCAGCATCCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20512.p1 GENE.S_Transcript_20512~~S_Transcript_20512.p1 ORF type:internal len:311 (+),score=44.86,RVT_1|PF00078.23|8.1e-42 S_Transcript_20512:1-930(+)
FITLVPKKDRSFKVRDFRPISLVTSVYKVITKLLALRVGAVLSSTISPSQSAFVGGRQILDAALVANEVVDDARRSGFQGVVFKLDFEKAYDRVSWSFLDKVMERKGFGVRWRRWIRGCFSNAYFSVLVNGAARSWFPSSRGLRQGDPLSPFLFTLVVDVLSRMVERAVVRGVVGGFPVGRENIMVSHLQFADDTILFLDASLWSFKNMLTILQIFEVISGMRINLGKCSVAGVHVDNEELEAFAELAGCQIQGWPMSYLGIPLGGNPRVVSFWDPVVDRIRKRLDGWRRVYYSFGGRITLLQSCLSSIP

Click here to download the sequence:
Link to NCBI Protein BLAST