Transcript Information: S_Transcript_205425.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.004264197554
Replicate 20.90193793788583
Replicate 30.57996025420128
Condition 2: 8 Hour
Replicate 12.0788902510413
Replicate 21.4773862309253
Replicate 31.273588378914
Condition 3: 24 Hour
Replicate 11.8547542586354
Replicate 21.4253969544873
Replicate 31.1104044706655


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_205425.p1 GENE.S_Transcript_205425~~S_Transcript_205425.p1 ORF type:complete len:318 (+),score=38.78,RVT_1|PF00078.23|6.3e-30 S_Transcript_205425:1433-2386(+)
ATGATTATTCAAGATATAATCAGGTTGTACAACGACAGGAAGAATGTCTCCCCTAGATGTCTGATGAAAATAGATATGCGAAAGGCATATGGCACTGTTGATTGGAATTTTCTTGAGAATATCTTGAAGGGCTTAGGCTGTCCTTTTAAATTTGTCAGATGGATTATGATGTGTGTTACTACCACAAGTTTCCAATTAAACATCAATGGTAAATTGCATCAAGAATTCAAAGGAGGAAAGGGTATTAGACAGGGTGATCACATGTCCCCCCTGTTGTTTGTGATGGTGATGGAATATCTCACAAGAATCTTGAAAAAGACAAGCCTCAAACCTGGTTTTAAGTATCATCCCATGTGTAAAAACCTTGGCCTAACAAAACTATGCTTTGCTGATGATTTAATGTTGTTTTGCAAAGCTGATATAATATCAATTGATCACTTGATGAAAAGCTTCGAGGCATTCTCTGGGGCTACTGGACTCCAAGCAAACTTACAGAAATCCCAAATCTACTTGGGAGGTGTTACCAGGGAGCAAAAGAGGAAGATAATGCAGACCACTGGATTCAAGGAAGGAGACTTCCCTATGAAATATTTGGGGATGCCTCTATCCCCCACAAAATGGAATAAAGCTGATTGTCACTTTCTGATGGAGAAGATAATTAAGAGGTTACATTCTTGGGGTAGCTGGAACCTCTCTCTGGTTGGGAGAACACAGTTAATCAATTCTGTACTGTACTCTATGCATGTGTATTGGACTTCTATCTTCGTAATCCATACTGGTGTTGTGAAACTCATTGAACAGCAGTGCAGGCAATTCCTTTGGGGGCAGCAAGCTGGGAGTAAGAAGATTCCTTTGGTTGCATGGGATAATGTTTGCAAACCAAAAAGCTGTGGTGGTTTGAGTGTTAAGAATTGTAAACTCTGGAATAGGGCAGCAATTGCTAAGTACCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_205425.p1 GENE.S_Transcript_205425~~S_Transcript_205425.p1 ORF type:complete len:318 (+),score=38.78,RVT_1|PF00078.23|6.3e-30 S_Transcript_205425:1433-2386(+)
MIIQDIIRLYNDRKNVSPRCLMKIDMRKAYGTVDWNFLENILKGLGCPFKFVRWIMMCVTTTSFQLNINGKLHQEFKGGKGIRQGDHMSPLLFVMVMEYLTRILKKTSLKPGFKYHPMCKNLGLTKLCFADDLMLFCKADIISIDHLMKSFEAFSGATGLQANLQKSQIYLGGVTREQKRKIMQTTGFKEGDFPMKYLGMPLSPTKWNKADCHFLMEKIIKRLHSWGSWNLSLVGRTQLINSVLYSMHVYWTSIFVIHTGVVKLIEQQCRQFLWGQQAGSKKIPLVAWDNVCKPKSCGGLSVKNCKLWNRAAIAKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST