Transcript Information: S_Transcript_205426.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3490461455621
Replicate 20.50835920639435
Replicate 30.33995826882213
Condition 2: 8 Hour
Replicate 10.88446319287648
Replicate 20.92786469012691
Replicate 31.0805268371189
Condition 3: 24 Hour
Replicate 11.3086796561185
Replicate 21.1488568080176
Replicate 31.394767432541


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_205426.p2 GENE.S_Transcript_205426~~S_Transcript_205426.p2 ORF type:complete len:217 (+),score=23.59,zf-RVT|PF13966.2|3.7e-17,zf-RVT|PF13966.2|2.7e+03 S_Transcript_205426:1481-2131(+)
ATGGACTGTGCCTGGTACTGGAAGAATATTAATAAATTGAGGGAGCACAAGCCTTTCCAAAATGGTTGCTGGCCTGTTAATGGAGAAGGACAATATACAATTGCCTTAGGATATAAAAGCCTACTGGGTGATCAGGCAAAATTCACTCTGTCACGAATCACTTGGGATAAGCTCACTGTGCCTAAGCATGCTATATATATGTGGATAATTACTCAAGAAAAACTCTTAACTAGAGACCTATTGGTGAAGATGAGAATTGCCATCTCTGATGATCAATGTCCCATGTGTCAACAGTCTACTGAGACTATAGAGCACCTATTCTTCACTTGCAATTACTCGAAAGAAGTTATGAATGAGATTATCAGGTGGCTAGGAATCAGACATGCACCTATTGAGAATCTGAAGTGGATGGAATGGCTAAGGAAACTTAGAAGCCCTAACAAGAAGAAAATGGTGATTTATTCAGTCTTTGCTGCTGCAGTGTACTTCCTGTGGGTGGAAAGAAACAAGATCATCTTCAAGCAAAGCAATATACAGCCACAGCAAATTGTGGCAGAAGTTAAGCATATCATTAGAATGAAGATAGCCATCCTACCTTGTAAAAACTTGAGTAACAAAATCCTTATGTATTTATTTTCGTTGTTAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_205426.p2 GENE.S_Transcript_205426~~S_Transcript_205426.p2 ORF type:complete len:217 (+),score=23.59,zf-RVT|PF13966.2|3.7e-17,zf-RVT|PF13966.2|2.7e+03 S_Transcript_205426:1481-2131(+)
MDCAWYWKNINKLREHKPFQNGCWPVNGEGQYTIALGYKSLLGDQAKFTLSRITWDKLTVPKHAIYMWIITQEKLLTRDLLVKMRIAISDDQCPMCQQSTETIEHLFFTCNYSKEVMNEIIRWLGIRHAPIENLKWMEWLRKLRSPNKKKMVIYSVFAAAVYFLWVERNKIIFKQSNIQPQQIVAEVKHIIRMKIAILPCKNLSNKILMYLFSLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST