Transcript Information: S_Transcript_205487.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value4E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21121429551731
Replicate 20.29183584070787
Replicate 30.29274184259683
Condition 2: 8 Hour
Replicate 11.1847439065074
Replicate 21.953097897119
Replicate 31.4661694119828
Condition 3: 24 Hour
Replicate 10.75127906184583
Replicate 20.299785867412
Replicate 30.46707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_205487.p1 GENE.S_Transcript_205487~~S_Transcript_205487.p1 ORF type:3prime_partial len:378 (-),score=69.44,FAD_binding_4|PF01565.19|3e-27 S_Transcript_205487:1-1131(-)
ATGAAGGCAATAAAATTTTTAACCATTTTGTCTTCCCTCCTCTTCCTTTGGAAAGCATCTTCACAAACAACCACCACTAATAATAATAACTTCCTCCAATGCCTCAAAAACCAAACTAACCCACCTGCTGATATTTCTCACATTCTTTATACCCCTTCAAATCCTGCTTTTCCCTCAATCTTGAGAGCACGTATTCAAAATCTCAGGTTCACAACTCCAAAAACATCAAAACCCAAATATCTCATCACTCCTACTAAAAAATCCCATATCTCAGCTGTTGTTAATTGCACCAAAAACTCAGGATTAAGGCTCATAGTTCGAAGTGGTGGGCATGATTTTGATGGATTATCTTACATTTCTGATGTCCCCTTTGTAACTTTAGATATGGTTAATTTCAGAACAATTCAAGTAGATGTTGCCACAAAAACTGCTTATGTTGAAGCAGGGGCAACACTTGGGGAATTTTACTATAGAATTTGGGAAAAGAGCAAAGTTCTTGGTTTCCCTGCTGGGGTTTGTCCAACTGTTGGGATTGGAGGGCATTTAAGTGGGGGTGGTTATGGTAATATGATGAGAAAATATGGGTTATCGGTTGACCAAATTATAGATGCTAAGTTAGTAGATGTTAATGGCAGAATTCTTGACAGAAAATCAATGGGAGAAGATCTTTTTTGGGCAATTAGAGGTGGGGGTGGTGCTAGCTTTGGTGTTATTTTATCTTATACAGTTAATTTAGTCCAAGTACCAGAAACTGTTACTGTGTTTAATGTCATGAGGTTTGAGAAAGATAATGTGACTAACCTTGTTCATAAATGGCAGAATGTAATGCAAGATATTGATGATGATTTGTTCATTAGGCTTCTATTGCAGCCTGTGACAATACCCAAGAGTGAAAGAAGAGGAGGAAATAAGAAGGCGATTCGGGTCACTTTTATTTCACTCTTCTTAGGAAGTGCTGATAAGTTGATTTCAGTGATGAATTCAGGATTTCCTGAATTGGGTTTGCAGAAAAGTGATTGTTTCAAAATGAGTTGGGTTGAATCTGTGTTGTTTTGGTATAATAATGACATTGGAACACCAATTGATGTGTTATTGAATCGAATATTTGATGCAAATTATCTCAAGAGGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_205487.p1 GENE.S_Transcript_205487~~S_Transcript_205487.p1 ORF type:3prime_partial len:378 (-),score=69.44,FAD_binding_4|PF01565.19|3e-27 S_Transcript_205487:1-1131(-)
MKAIKFLTILSSLLFLWKASSQTTTTNNNNFLQCLKNQTNPPADISHILYTPSNPAFPSILRARIQNLRFTTPKTSKPKYLITPTKKSHISAVVNCTKNSGLRLIVRSGGHDFDGLSYISDVPFVTLDMVNFRTIQVDVATKTAYVEAGATLGEFYYRIWEKSKVLGFPAGVCPTVGIGGHLSGGGYGNMMRKYGLSVDQIIDAKLVDVNGRILDRKSMGEDLFWAIRGGGGASFGVILSYTVNLVQVPETVTVFNVMRFEKDNVTNLVHKWQNVMQDIDDDLFIRLLLQPVTIPKSERRGGNKKAIRVTFISLFLGSADKLISVMNSGFPELGLQKSDCFKMSWVESVLFWYNNDIGTPIDVLLNRIFDANYLKRK

Click here to download the sequence:
Link to NCBI Protein BLAST