Transcript Information: S_Transcript_20555.p1


Annotated TAIR IDAT3G52520.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19473483-19473884 | Forward length=133
E-Value1.2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.38458464609
Replicate 216.953511975775
Replicate 315.336591058994
Condition 2: 8 Hour
Replicate 116.162401082459
Replicate 222.842834926879
Replicate 321.315847604981
Condition 3: 24 Hour
Replicate 113.22190316536
Replicate 28.2305420987788
Replicate 313.673003019616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20555.p1 GENE.S_Transcript_20555~~S_Transcript_20555.p1 ORF type:complete len:190 (+),score=21.07 S_Transcript_20555:186-755(+)
ATGGAGGAGAGAGAAACCGAAGCCGAAACTGAAACCACCACAACAACAATCAAGCGAAGAAACACCTTACCAGTACCTTTGTCAATCCATCTCCTCAACGGCAACCAACACTACCACTACCACAACCACTGTAATCACCACTCATCTCCGTCGTCGTCGCCGTCACCGTCAAAGTCACTCGATTTGGAGCTAATCTCTCTCAAAACACCACCACCAGGAGCCTTATACACCTCTTTGAAAGACCTAATCCCTTCGAACTCCTACTCGATTCTCTCTCCTACTCCTCCACCACCTTCCTCCATCTCCATCGCCGCCGTTTCTTCTTCCTCCTCCGGCGGTGGCTCCGGCTACGAGATATCGATCCGAAATCGGCTAGTTAAGCAAGCTGCTTGGGCTTATCTTCAACCTGCTGCTTCTTCTTCTCCGACTTCCTCTCGCCGGTGCTGTTTCTTCTTCTCCGGTGATGTTTTCCGGCGCTTCTTGGTCGGGTTTCGGGCTTTTGTTTTCGAGTCCGCGACACGTGTCTACGACTGGTTGGTCGACGCTCTTTGGCTCCTGCTCTGTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20555.p1 GENE.S_Transcript_20555~~S_Transcript_20555.p1 ORF type:complete len:190 (+),score=21.07 S_Transcript_20555:186-755(+)
MEERETEAETETTTTTIKRRNTLPVPLSIHLLNGNQHYHYHNHCNHHSSPSSSPSPSKSLDLELISLKTPPPGALYTSLKDLIPSNSYSILSPTPPPPSSISIAAVSSSSSGGGSGYEISIRNRLVKQAAWAYLQPAASSSPTSSRRCCFFFSGDVFRRFLVGFRAFVFESATRVYDWLVDALWLLLCR*

Click here to download the sequence:
Link to NCBI Protein BLAST