Transcript Information: S_Transcript_205719.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value7.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.420838107733
Replicate 26.4123378516915
Replicate 32.5438256667035
Condition 2: 8 Hour
Replicate 12.2060748603931
Replicate 20.33061845280384
Replicate 33.2551294372139
Condition 3: 24 Hour
Replicate 10.64566158100278
Replicate 22.4561766240377
Replicate 32.7334235315889


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_205719.p1 GENE.S_Transcript_205719~~S_Transcript_205719.p1 ORF type:complete len:203 (-),score=31.12,DUF640|PF04852.8|1.9e-63 S_Transcript_205719:189-797(-)
ATGGATTCAAGCAACACATTCATGCTAGGTACTATCACAACATCATCACCATCATCACCACCACCATCATCATCATCATCACCATCGTCGTCATCATCAAGCAGCAGGTATGAGAACCAGAAAAGAAGAGACTGGAACACCTTTGGCCAATATCTAAAGAACCACAGACCCCCACTGAGTTTGAACAGGTGCAGTGGGGCCCACGTCCTGGAATTCCTTCGTTACTTAGACCAGTTTGGTAAAACCAAAGTCCATACCCAAATCTGCCCCTTCTACGGGCACCCGAACCCGCCTGCCACCTGCCCGTGCCCGTTGAGGCAAGCTTGGGGCTCCCTTGATGCTTTAATCGGACGCCTCAGAGCCGCCTTTGAGGAGAATGGTGGTAAGCCCGAACAGAACCCGTTTGGGGCCCGGGCTGTGAGGCTTTACCTTAGGGAAGTCAGGGATTTGCAGTCTAAGGCTAGGGGGATTAGCTATGAGAAGAAGAAGCGTAAGCGACCCCCGCCTCAGCTCCCGCCACCACCTCAACCACCGCCGCCTTTGCAGCTCGATCCCTCCGGTCGTCATCCGCTCGGCCCGCCGCCACTCCCGCCACCAGGTGCTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_205719.p1 GENE.S_Transcript_205719~~S_Transcript_205719.p1 ORF type:complete len:203 (-),score=31.12,DUF640|PF04852.8|1.9e-63 S_Transcript_205719:189-797(-)
MDSSNTFMLGTITTSSPSSPPPSSSSSPSSSSSSSRYENQKRRDWNTFGQYLKNHRPPLSLNRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPATCPCPLRQAWGSLDALIGRLRAAFEENGGKPEQNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQLPPPPQPPPPLQLDPSGRHPLGPPPLPPPGAS*

Click here to download the sequence:
Link to NCBI Protein BLAST