Transcript Information: S_Transcript_205723.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.197625566124
Replicate 25.0560559402638
Replicate 31.7930437859056
Condition 2: 8 Hour
Replicate 12.9618597662685
Replicate 22.6411210199677
Replicate 36.6612023765567
Condition 3: 24 Hour
Replicate 10.45510173938738
Replicate 21.573875803913
Replicate 32.2769901199063


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_205723.p1 GENE.S_Transcript_205723~~S_Transcript_205723.p1 ORF type:internal len:144 (-),score=0.17,DUF640|PF04852.8|7.5e-29 S_Transcript_205723:3-431(-)
CAAACGCATCCTATATTTAGCTTTCTTTTTTTCTTCTTTCCCTTTCACCACTGTCAGTCCAAGAAAAATATGGATCTCATTTCAGCTAGTACTAATAATCACACTTCCTCAAACACCACCAACCACCACCATACAATCACTAATTGCTCTCCACCTCCTTCTTCCACTTTATCCTCAACCGCCAGTAGCGGCGTTTTTAGTGGTGGTGGTGGGAGTGGAGGACAGTTGAGTAGGTATGAGAACCAGAAGCGTCGAGACTGGAACACTTTCGGGCAGTACTTACGTAATCACCGCCCTCCGCTGACGTTAGCACGGTGTAGCGGGGCCCACGTGCTAGAATTCTTGAGATATCTAGACCAGTTCGGAAAGACCAAAGTCCACAACCCGCCTTGCCCCTTCTTCGGGCACCCCAACCCGCCTGCCCCCTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_205723.p1 GENE.S_Transcript_205723~~S_Transcript_205723.p1 ORF type:internal len:144 (-),score=0.17,DUF640|PF04852.8|7.5e-29 S_Transcript_205723:3-431(-)
QTHPIFSFLFFFFPFHHCQSKKNMDLISASTNNHTSSNTTNHHHTITNCSPPPSSTLSSTASSGVFSGGGGSGGQLSRYENQKRRDWNTFGQYLRNHRPPLTLARCSGAHVLEFLRYLDQFGKTKVHNPPCPFFGHPNPPAPC

Click here to download the sequence:
Link to NCBI Protein BLAST