Transcript Information: S_Transcript_206140.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value8.8E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3141740204505
Replicate 211.319170294725
Replicate 32.2452026536557
Condition 2: 8 Hour
Replicate 12.4106962967194
Replicate 20
Replicate 31.8535519656505
Condition 3: 24 Hour
Replicate 10
Replicate 28.8684480081359
Replicate 32.8511876284044


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206140.p2 GENE.S_Transcript_206140~~S_Transcript_206140.p2 ORF type:3prime_partial len:115 (+),score=-9.81,Chloroa_b-bind|PF00504.17|9.6e-21 S_Transcript_206140:60-401(+)
ATGTCTTTCCTCGGCAACACCAAGGCCCTCCGCGGCAAGAATGTCGCCTCGAGCGGCATGAAGTGCGCTGCGCAGATGCGTCGCACCAGCAAGGGCAAGTCCGCCGGCGGCAGCAGCGCGCAGGTGTGGTACGGCCCGGACCGCCCTCTGTTCCTGGGCCCGTTCTCCGATGACGCGGTGCCGCCGTACCTCAACGGCGAGTTCCCCGGTGACTATGGCTGGGACACGGCGGGCCTGTCTGCGGACCCCGAGACGTTCCGCCGCTACCGCGAGCTTGAGGTGATCCATGCCCGGTGGGCCATGCTTGGCGCCCTCGGCTGCGTGACCACCGAGATCCTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206140.p2 GENE.S_Transcript_206140~~S_Transcript_206140.p2 ORF type:3prime_partial len:115 (+),score=-9.81,Chloroa_b-bind|PF00504.17|9.6e-21 S_Transcript_206140:60-401(+)
MSFLGNTKALRGKNVASSGMKCAAQMRRTSKGKSAGGSSAQVWYGPDRPLFLGPFSDDAVPPYLNGEFPGDYGWDTAGLSADPETFRRYRELEVIHARWAMLGALGCVTTEILQ

Click here to download the sequence:
Link to NCBI Protein BLAST