Transcript Information: S_Transcript_206141.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value8.2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5207429277246
Replicate 21.260730831858
Replicate 30.5269353166743
Condition 2: 8 Hour
Replicate 10.81239582160507
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.41609301886846
Replicate 22.8059957189763
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206141.p2 GENE.S_Transcript_206141~~S_Transcript_206141.p2 ORF type:3prime_partial len:105 (+),score=-11.40,Chloroa_b-bind|PF00504.17|1e+04,Chloroa_b-bind|PF00504.17|1.5e-21 S_Transcript_206141:58-369(+)
ATGCAGATGACCAAGTTCTCCGCTCGCCCGATGGCGCCGCTGGCGTCTCGTGGCCGCGTGGCAGCCCGCGCCGCCGTGGAGTTCTACGGCCCTGACCGCGCCAAGTGGCTGGGCCCCTTCTCCGAGGGCGATGTGCCGCCGTACCTCAAGGGCGAGTTCCCCGGTGACTATGGCTGGGACACCGCGGGCCTGTCCGCCGACCCCGAGACCTTCCGGCAGTACCGCGAGATCGAGCTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGCGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206141.p2 GENE.S_Transcript_206141~~S_Transcript_206141.p2 ORF type:3prime_partial len:105 (+),score=-11.40,Chloroa_b-bind|PF00504.17|1e+04,Chloroa_b-bind|PF00504.17|1.5e-21 S_Transcript_206141:58-369(+)
MQMTKFSARPMAPLASRGRVAARAAVEFYGPDRAKWLGPFSEGDVPPYLKGEFPGDYGWDTAGLSADPETFRQYREIELIHARWAMLGALGCVTPEILSKYNGV

Click here to download the sequence:
Link to NCBI Protein BLAST