Transcript Information: S_Transcript_206143.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value6.7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24871963771197
Replicate 21.8557486543704
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.19921352901852
Condition 3: 24 Hour
Replicate 10
Replicate 21.6944905851475
Replicate 30.47144008233862


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206143.p2 GENE.S_Transcript_206143~~S_Transcript_206143.p2 ORF type:3prime_partial len:107 (+),score=-9.24,Chloroa_b-bind|PF00504.17|1.5e-21 S_Transcript_206143:58-375(+)
ATGCAGATGACCAAGTCCTTCACATCCGCCGCCCGCGTGGCGCCCGTGGCTGGCCGCAGCCGCGTGGCAGCCCGTGCCGCCGTGGAGTTCTACGGCCCGGACCGCGCCAAGTGGCTTGGACCCTTCTCTGAGGGTGATGTGCCACCGTACCTCAAGGGCGAGTTCCCTGGTGACTATGGCTGGGACACCGCCGGCCTGTCCGCCGACCCCGAGACGTTCCGCCAGTACCGCGAGATCGAGCTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGCGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206143.p2 GENE.S_Transcript_206143~~S_Transcript_206143.p2 ORF type:3prime_partial len:107 (+),score=-9.24,Chloroa_b-bind|PF00504.17|1.5e-21 S_Transcript_206143:58-375(+)
MQMTKSFTSAARVAPVAGRSRVAARAAVEFYGPDRAKWLGPFSEGDVPPYLKGEFPGDYGWDTAGLSADPETFRQYREIELIHARWAMLGALGCVTPEILSKYNGV

Click here to download the sequence:
Link to NCBI Protein BLAST