Transcript Information: S_Transcript_206146.p1


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value8.6E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.0261762584891
Replicate 30.4289008391535
Condition 2: 8 Hour
Replicate 10.16531310323359
Replicate 20
Replicate 30.49571738616236
Condition 3: 24 Hour
Replicate 10
Replicate 22.4596384656501
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206146.p1 GENE.S_Transcript_206146~~S_Transcript_206146.p1 ORF type:internal len:129 (+),score=-12.05,Chloroa_b-bind|PF00504.17|2.5e-21 S_Transcript_206146:3-386(+)
CCAGTTCGTGACGAGACGAAACCTGACCGACTTTCTTCTACCTCTCCTTTCTTTTCAGATTCGAAGACAATGAGCGCATTCGCCGGCTCCAAGGCAACCCGCTCACTCGCGGCGCCTGCCGCCCGCAGCGTGCGCGCCCGCGCGGCTGTGGAGTTCTACGGCCCTGACCGCGCCAAGTGGCTGGGCCCCTTCTCTGAGGGTGATGTGCCACCGTACCTCAAGGGCGAGTTCCCTGGTGACTATGGCTGGGACACCGCCGGCCTGTCCGCCGACCCCGAGACGTTCCGCCAGTACCGCGAGATCGAGCTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGCGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206146.p1 GENE.S_Transcript_206146~~S_Transcript_206146.p1 ORF type:internal len:129 (+),score=-12.05,Chloroa_b-bind|PF00504.17|2.5e-21 S_Transcript_206146:3-386(+)
PVRDETKPDRLSSTSPFFSDSKTMSAFAGSKATRSLAAPAARSVRARAAVEFYGPDRAKWLGPFSEGDVPPYLKGEFPGDYGWDTAGLSADPETFRQYREIELIHARWAMLGALGCVTPEILSKYNGV

Click here to download the sequence:
Link to NCBI Protein BLAST