Transcript Information: S_Transcript_206180.p1


Annotated TAIR IDAT3G50860.1
Annotated Gene NameClathrin adaptor complex small chain family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18902346-18903959 | Forward length=166
E-Value4.7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.325351036179
Replicate 218.017944805304
Replicate 320.287009691961
Condition 2: 8 Hour
Replicate 119.666748848023
Replicate 225.851913983684
Replicate 325.105331623645
Condition 3: 24 Hour
Replicate 120.995360243738
Replicate 219.516059968521
Replicate 319.617145648424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206180.p1 GENE.S_Transcript_206180~~S_Transcript_206180.p1 ORF type:5prime_partial len:180 (+),score=19.03,Clat_adaptor_s|PF01217.16|1.3e-42 S_Transcript_206180:1-540(+)
TCTCTAGTACACATAGGGCACCCTCAAATCAGATCAAATTCAGAAAAAATGATAAAGGCAGTGATAGTAATGAACACACAGGGCAAGCCTCGGCTCGTCAAATTCTACGATTTTCAGCCTCCAGAGAAGCAACAGGACCTTATTCGCACTCTTTACTCAGTATTATGCAACAGGCCTGAGAATGTCAGCAATTTTGTGGATGTGGATTCCATTTTTGGCCCGGATTCTCGGCTTGTATACAAGCATTATGAAACCCTATACTTTATATTTGTGTATGATAGTGCTGAAAATGAGCTTGCTATGCTTGATTTAATACAAGAAACGTTGGACAAGTGTTTCAAGAATGTTTGTGAGCTTGATATAGTGTTCAATTTTGGCAAGCTGCATACTATCCTTGATGAGATAATCTTTGGAGGTCAAGTATTGGAAACTAATTCTGCAGAAAACATCACGGCTGTCGAAGAAATATCAAGATTGGAAACTACTTCTAACACCATCAATCTCGTCCCAAGATCTGTTTCAAGCTGGCGAGGGCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206180.p1 GENE.S_Transcript_206180~~S_Transcript_206180.p1 ORF type:5prime_partial len:180 (+),score=19.03,Clat_adaptor_s|PF01217.16|1.3e-42 S_Transcript_206180:1-540(+)
SLVHIGHPQIRSNSEKMIKAVIVMNTQGKPRLVKFYDFQPPEKQQDLIRTLYSVLCNRPENVSNFVDVDSIFGPDSRLVYKHYETLYFIFVYDSAENELAMLDLIQETLDKCFKNVCELDIVFNFGKLHTILDEIIFGGQVLETNSAENITAVEEISRLETTSNTINLVPRSVSSWRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST