Transcript Information: S_Transcript_206518.p2


Annotated TAIR IDAT5G47960.1
Annotated Gene NameRAB GTPase Homolog A4C
Annotated Gene Symbol(s)SMG1, ATRABA4C, RABA4C
Annotation TypeOrtholog
Chromosome Positionchr5:19421533-19422473 | Reverse length=223
E-Value1.5E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2820389181757
Replicate 26.3442356238347
Replicate 34.9866625462096
Condition 2: 8 Hour
Replicate 110.067780836415
Replicate 27.8733544568995
Replicate 38.96546379952
Condition 3: 24 Hour
Replicate 15.8128016155229
Replicate 25.2525571893681
Replicate 34.4382138223595


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206518.p2 GENE.S_Transcript_206518~~S_Transcript_206518.p2 ORF type:complete len:233 (+),score=46.28,Ras|PF00071.18|2.3e-60,Roc|PF08477.9|1.6e-33,Arf|PF00025.17|1.6e-13,MMR_HSR1|PF01926.19|1.5e-05 S_Transcript_206518:1642-2340(+)
ATGTCGAGAATGAATGGTTATGGAGGAGTAGGAGGCGGGGCACTAAATCAAAAGATAGATTATGTGTTCAAAGTGGTTCTGATAGGGGATTCAGCTGTAGGCAAATCCCAGCTGCTGGCCCGCTTTGCTCGTAATGAGTTTAGCATCGATTCTAAGGCTACCATAGGCGTTGAGTTCCAGACCCGTACCCTTTCCCTTGATCACAAGACTATCAAGGCCCAGATTTGGGATACTGCTGGCCAGGAGAGGTATCGGGCAGTGACAAGTGCATATTATCGTGGTGCAGTTGGGGCAATGCTGGTGTATGACATAACCAAACGCCAGACATTTGATCACATGTCAAGATGGTTGGAGGAGTTGCGGGGTCATGCTGATAAAAATATTGTCATCATGCTCGTAGGAAACAAATCTGATCTGGGCACGCTTAGGGCTGTCGCCACTGAGGATGCCAAAGAGTTTGCAGAGAAAGAAGGCCTCTTTTTCATGGAAACATCAGCTCTCGAATCTGTTAATGTTGAGACCGCTTTTATTACAGTCCTTACAGAGATCTATAGGATTGTCAGTAGGAAGACCCTTGTTGCTAATGAAGAAGCAGATGGTGGAGGAAGTTCAGCCCTTCTTACTGGAAAGCAAGTCGCCCTTCCAGGACAGGAACAGGCATCTACAGGGGGGAAGTTGAGTTGTTGCATGTATTCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206518.p2 GENE.S_Transcript_206518~~S_Transcript_206518.p2 ORF type:complete len:233 (+),score=46.28,Ras|PF00071.18|2.3e-60,Roc|PF08477.9|1.6e-33,Arf|PF00025.17|1.6e-13,MMR_HSR1|PF01926.19|1.5e-05 S_Transcript_206518:1642-2340(+)
MSRMNGYGGVGGGALNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSIDSKATIGVEFQTRTLSLDHKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHMSRWLEELRGHADKNIVIMLVGNKSDLGTLRAVATEDAKEFAEKEGLFFMETSALESVNVETAFITVLTEIYRIVSRKTLVANEEADGGGSSALLTGKQVALPGQEQASTGGKLSCCMYS*

Click here to download the sequence:
Link to NCBI Protein BLAST