Transcript Information: S_Transcript_206541.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.15368946736334
Condition 2: 8 Hour
Replicate 10.17771158597611
Replicate 20.18643207199772
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206541.p1 GENE.S_Transcript_206541~~S_Transcript_206541.p1 ORF type:3prime_partial len:120 (+),score=16.98,gag_pre-integrs|PF13976.2|4.1e-09 S_Transcript_206541:322-678(+)
ATGAGGCAGAATCTGGTCCTTGGTAAAGCACATGATGGATTGTACTTTGTTGATTCAAGTATGCAGAAATTATCCCCTGATTCTGCACAATCTGTCTATCATGCTAATACTGTTCAATCCAGCTCTTTGTTATGGCATTGTAGGCTTGGACATATGCCTTTTGACAAAATAAGATGTATTCATTCCATTTCCTGTAAATCTGCACCAAATGTTGTGTGTGATATTTGTCCTAAAGCAAGATTGACTAGATGTTCATTTCCTGCTAGTCATATACAAACTCATTCTGTTTTTGAACTACTTCATGTTGATCTGTGGGGACCATATGCTACTCCTACTTACAATGGTTTTAAATATTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206541.p1 GENE.S_Transcript_206541~~S_Transcript_206541.p1 ORF type:3prime_partial len:120 (+),score=16.98,gag_pre-integrs|PF13976.2|4.1e-09 S_Transcript_206541:322-678(+)
MRQNLVLGKAHDGLYFVDSSMQKLSPDSAQSVYHANTVQSSSLLWHCRLGHMPFDKIRCIHSISCKSAPNVVCDICPKARLTRCSFPASHIQTHSVFELLHVDLWGPYATPTYNGFKYF

Click here to download the sequence:
Link to NCBI Protein BLAST