Transcript Information: S_Transcript_206688.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88710004117268
Replicate 20
Replicate 30.61475786945335
Condition 2: 8 Hour
Replicate 11.2439811018328
Replicate 22.7964810799658
Replicate 30.71052825349938
Condition 3: 24 Hour
Replicate 12.0024476533045
Replicate 20.37773019293912
Replicate 32.3120207371356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206688.p1 GENE.S_Transcript_206688~~S_Transcript_206688.p1 ORF type:5prime_partial len:120 (+),score=13.75,DDE_Tnp_4|PF13359.2|1.4e-20 S_Transcript_206688:2-361(+)
ACTTACCCAACGCAAAATGTGATGGCAATTTGTAACTTTGATATGTTGTTCACCTTTGTTCAAACTGGCTGGGAGGGTTCTGCTCATGACACACGTATTCTTACCACTACATTGGAAAAGTTTAAAGGCAAGGACATATTTCCATATGCTCCTGAAGGAAAGTATTATCTTGCGGATGTTGGGTATCCAAACATGAAAGGGTTTCTTGCTCCTTTTAAGGGAAAAACACTTCGTTATCATCTTCCAGATTTTAAACGTTCAAGCCAACCTCCAACAGGATATCACGAAGTCTTTAATTTTGCACATGCATCACTTCGGAATGTAATTGAACGTACATTTGGAGTTTGGAAAAATAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206688.p1 GENE.S_Transcript_206688~~S_Transcript_206688.p1 ORF type:5prime_partial len:120 (+),score=13.75,DDE_Tnp_4|PF13359.2|1.4e-20 S_Transcript_206688:2-361(+)
TYPTQNVMAICNFDMLFTFVQTGWEGSAHDTRILTTTLEKFKGKDIFPYAPEGKYYLADVGYPNMKGFLAPFKGKTLRYHLPDFKRSSQPPTGYHEVFNFAHASLRNVIERTFGVWKNR*

Click here to download the sequence:
Link to NCBI Protein BLAST