Transcript Information: S_Transcript_206691.p3


Annotated TAIR IDAT5G35695.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13869120-13869941 | Forward length=211
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.661300123518
Replicate 21.0295968460174
Replicate 31.5983704605787
Condition 2: 8 Hour
Replicate 11.279523419028
Replicate 21.4914565759818
Replicate 31.8473734590984
Condition 3: 24 Hour
Replicate 15.0971394811386
Replicate 24.0794860837425
Replicate 34.8762619183224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206691.p3 GENE.S_Transcript_206691~~S_Transcript_206691.p3 ORF type:complete len:150 (-),score=27.71,DDE_Tnp_4|PF13359.2|7.1e-12 S_Transcript_206691:596-1045(-)
ATGAAAGGGTTTCTTGCTCCTTTTAAGGGAAAAACACTTCGTTATCATCTTCCAGATTTTAAACGTTCAAGCCAACCTCCAACAGGATATCACGAAGTCTTTAATTTTGCACATGCATCGCTTCGGAATGTAATTGAACGTACATTTGGAGTTTGGAAAAATAGGTGGAGGATATTGTTTAAGATGCCAAGTTACAAATTCTCTACGCAATGTAAAATTGTGGCAACCACTATGGCTCTTCACAATTTTATCAGAAAGCACGCAATTAATGATGAAGAGTTTGACAAGTTTGATGAAGACCCCAATTACATGCCCGATGTAGATGGTGAAAATGAGGAAGAGGAAAGCAATAGAGATGATAGTTCATATGAGCATGGTGGAGCATTGGATGATCGTGATATGGCTATTGTTCGTAATGCAATTGTTAGATCTTTAATGCATGGAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206691.p3 GENE.S_Transcript_206691~~S_Transcript_206691.p3 ORF type:complete len:150 (-),score=27.71,DDE_Tnp_4|PF13359.2|7.1e-12 S_Transcript_206691:596-1045(-)
MKGFLAPFKGKTLRYHLPDFKRSSQPPTGYHEVFNFAHASLRNVIERTFGVWKNRWRILFKMPSYKFSTQCKIVATTMALHNFIRKHAINDEEFDKFDEDPNYMPDVDGENEEEESNRDDSSYEHGGALDDRDMAIVRNAIVRSLMHGK*

Click here to download the sequence:
Link to NCBI Protein BLAST