Transcript Information: S_Transcript_206962.p1


Annotated TAIR IDAT2G38420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16091093-16092454 | Forward length=453
E-Value6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6824311125689
Replicate 21.1411787702163
Replicate 31.3779055694644
Condition 2: 8 Hour
Replicate 10.24511942893256
Replicate 21.1571645848134
Replicate 31.7150681981019
Condition 3: 24 Hour
Replicate 11.5065436890065
Replicate 21.3025179066866
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206962.p1 GENE.S_Transcript_206962~~S_Transcript_206962.p1 ORF type:3prime_partial len:174 (-),score=27.41,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|3e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|1.6e+02,PPR|PF01535.16|0.041,PPR|PF01535.16|83,PPR|PF01535.16|0.00013,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.3e+03 S_Transcript_206962:3-521(-)
ATGATGACAATAAGAAAGAACAAAACCCTACTTCAAAATTCCCAATTCACTGAACTCAACCATGTTCTCTCCCACCTCCAAAAGGTTGAAAATTTTGAAACCCCAGAAAGTATTTTGGTTAATTTGATTAGGGTTTATGGAGGAAAGGGTATGATTAATGAAGCTATTGATTTGTTCTTCAAGATTCCCTCTTTCAGGTGTGTTCCTACTGTGAATTCACTCAATTCATTGATTTTGATATTATGTAGAAATAGAGAATTTTTGAGATTTGTTCCTCAGTTGTTGTTAAAGAGTAGGGTTCTGAATATTCAGATCGAGGAATCGAGTTTTTCGATTTTGATTAGTACCCTTTGTAGGATTGGTAGGGTTGATTATGGTCTTAAGTTGCTCAAGTATATGATTGATGATGGCTTTAACCCTGATGACAAAATTTGTTCTTTGGTATTGTCATCATTGTGTAAGCAAAAGGGTATGACTAGTTTTGAGGTAATTAATGTTATGGAGGATATGAAAGGGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206962.p1 GENE.S_Transcript_206962~~S_Transcript_206962.p1 ORF type:3prime_partial len:174 (-),score=27.41,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|3e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|1.6e+02,PPR|PF01535.16|0.041,PPR|PF01535.16|83,PPR|PF01535.16|0.00013,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.3e+03 S_Transcript_206962:3-521(-)
MMTIRKNKTLLQNSQFTELNHVLSHLQKVENFETPESILVNLIRVYGGKGMINEAIDLFFKIPSFRCVPTVNSLNSLILILCRNREFLRFVPQLLLKSRVLNIQIEESSFSILISTLCRIGRVDYGLKLLKYMIDDGFNPDDKICSLVLSSLCKQKGMTSFEVINVMEDMKGF

Click here to download the sequence:
Link to NCBI Protein BLAST