Transcript Information: S_Transcript_206970.p1


Annotated TAIR IDAT2G38420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16091093-16092454 | Forward length=453
E-Value6E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0355253398903
Replicate 22.0603383244372
Replicate 31.3634707610444
Condition 2: 8 Hour
Replicate 12.0744543110052
Replicate 21.8280498888493
Replicate 31.1611745777033
Condition 3: 24 Hour
Replicate 11.2749931998401
Replicate 21.763720745241
Replicate 31.6683842602606


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_206970.p1 GENE.S_Transcript_206970~~S_Transcript_206970.p1 ORF type:5prime_partial len:257 (-),score=50.07,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|2.7e-17,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.57,PPR_2|PF13041.2|18,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.15,PPR|PF01535.16|0.0034,PPR|PF01535.16|0.3,PPR|PF01535.16|0.00011,PPR|PF01535.16|5.5e-06,PPR|PF01535.16|0.1,PPR|PF01535.16|0.68,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.00098,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.8e+03 S_Transcript_206970:180-950(-)
GATATGAAAGGGTTTGGTTTTTGCCTCGATAGAGCTGATTTTTACAATGTGATTAAGTTCTTGGTTCAACAAGGAAAGGGTAAAGATGCATTTGATGTTCTGTGTGAAATGAAAAGGGAAGGTATTAAGCCCGATATTGCATGCTATACGATGGTTTTGCACGGTCTTGTTGAAGAAGGGGTGTTTCCTAGAGTAGAAGAGTTGTTTGATGAAATTCTCGTGTTTGGTTTGGTTCCAGATGTGCACACTTATAATGCGTACATAAACGGGTTATGCAAACAAAAGAAAGCTGATTCTGCTTGTGCAATGATTAGTTATATGCAGCAACTTGGTTGCCAACCTGATTTGGTTACTTACAAGACAGTCTTGGAAGCATATTGTAAGTTTGGGGAATTGAGAAGGGCAAGGGAAGTTTGGAAGGAGATTAAATGGAAAGGCATGGAATTAGATTTGGAAACATATAGAATAATGATTGAAGCATTTGTCACTCGAGGTGAAGCAACTGAAGCTTGCAATATGTTGGAAGAATTGCTTTCCAACAGTTCCATTGCTATGTCTTCTTCACTTGATGGTATCATAGGTAGTCTGTGCCGTGGGGGACTTGTTTCAGAGGCACTAAACACATTTGAAAAAGCTTATTCTTGTGATGATGTTCCTGGGTGTAGGGCTTGGGAAGCACTTCTGCTCAGGTTAAGTGGTTACGAGACAGATTTGTTGGCTAATTTGGTAAACTTACATGAGGGGTTGGCTTCTAAACCGAAGCAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_206970.p1 GENE.S_Transcript_206970~~S_Transcript_206970.p1 ORF type:5prime_partial len:257 (-),score=50.07,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|2.7e-17,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.57,PPR_2|PF13041.2|18,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.15,PPR|PF01535.16|0.0034,PPR|PF01535.16|0.3,PPR|PF01535.16|0.00011,PPR|PF01535.16|5.5e-06,PPR|PF01535.16|0.1,PPR|PF01535.16|0.68,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.00098,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.8e+03 S_Transcript_206970:180-950(-)
DMKGFGFCLDRADFYNVIKFLVQQGKGKDAFDVLCEMKREGIKPDIACYTMVLHGLVEEGVFPRVEELFDEILVFGLVPDVHTYNAYINGLCKQKKADSACAMISYMQQLGCQPDLVTYKTVLEAYCKFGELRRAREVWKEIKWKGMELDLETYRIMIEAFVTRGEATEACNMLEELLSNSSIAMSSSLDGIIGSLCRGGLVSEALNTFEKAYSCDDVPGCRAWEALLLRLSGYETDLLANLVNLHEGLASKPKQK*

Click here to download the sequence:
Link to NCBI Protein BLAST