Transcript Information: S_Transcript_20698.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0161401399871
Replicate 24.1183873840694
Replicate 33.3196924950481
Condition 2: 8 Hour
Replicate 15.5446014824546
Replicate 26.8607002495162
Replicate 34.8315921237958
Condition 3: 24 Hour
Replicate 14.5146092547228
Replicate 23.9283940065669
Replicate 34.3718210302201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20698.p1 GENE.S_Transcript_20698~~S_Transcript_20698.p1 ORF type:5prime_partial len:150 (+),score=8.88,zf-RVT|PF13966.2|1.1e-07,zf-RVT|PF13966.2|1.8e+03 S_Transcript_20698:3-452(+)
TTGGATAGAGTTAATACTCATGATGTTCTGCAGAGACGTTTCCCGCGGTGGTGCCTCTCTCCTGGAGTTTGTGTTATGTGTCGAAGAGAGAACGAGACCATTCCTCATCTCTTCCTGACCTGCGATGTGGCGCAAGGGCTATGGTATAGGCTTTTTGGGGTGAGGGGAGAAAGTTGGGTGTGTCCATCAAATATTTCTCATCTTTTGTTGGGACATCAGGTGGGCTTTGGGAGAGGAAAGGATCAAAGCGTGTTGTGGAGGGGCGCGATGATGGCTGTGCTCTGGAGCATTTGGTTAGAGAGGAACACAAGGATTTTCAATGGGGTGATAACCCCCCCTGCTCTTGTCTGGGATAGGGTGTTGTATAAGGCCTCTTTATGGGCCCGGGCGTTTGGAGCTTTTAGTGATATCCCCCTATCCGCGGTTGTGCGGCACTGGGATATTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20698.p1 GENE.S_Transcript_20698~~S_Transcript_20698.p1 ORF type:5prime_partial len:150 (+),score=8.88,zf-RVT|PF13966.2|1.1e-07,zf-RVT|PF13966.2|1.8e+03 S_Transcript_20698:3-452(+)
LDRVNTHDVLQRRFPRWCLSPGVCVMCRRENETIPHLFLTCDVAQGLWYRLFGVRGESWVCPSNISHLLLGHQVGFGRGKDQSVLWRGAMMAVLWSIWLERNTRIFNGVITPPALVWDRVLYKASLWARAFGAFSDIPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST