Transcript Information: S_Transcript_20699.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1632699462281
Replicate 20.54141814865067
Replicate 30.33943686043437
Condition 2: 8 Hour
Replicate 10.26166123088507
Replicate 20.41175181545509
Replicate 30
Condition 3: 24 Hour
Replicate 10.26803538025269
Replicate 20.69520894405974
Replicate 30.61894587497217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20699.p1 GENE.S_Transcript_20699~~S_Transcript_20699.p1 ORF type:5prime_partial len:163 (+),score=18.41,zf-RVT|PF13966.2|2e-07,zf-RVT|PF13966.2|1.6e+03 S_Transcript_20699:3-491(+)
TTGGATAGAGTTAATACTCATGATGTTCTGCAGAGACGTTTCCCGCGGTGGTGCCTCTCTCCTGGAGTTTGTGTTATGTGTAGAAGAGAGAATGAGACCACTTCTCATCTCTTTTTGACTTGCGATGTGGCGCAAGGTCTATGGGGTAGGCTATTTGGGGTTAGGGGAGAGAACTGGGTGTGCCCACCAACTATCCCTCATCTCTTGTTGGGTCGTCATGTGGGTTTTGGGAGAGGAAAGGATCAAAGCTTGTTGTGGCATGGTGCTATGATGGCTATGCTTTGGAGTATTTGGCTAGAGAGGAATGCAAGGATTTTCCATGGGGTGATAACCCCCCTGCTTTTGTTTGGGATAGGGTGTTGTATAAGGCCTCTTTATGGGCCCGGGCGTTTGGAGCTTTTAGTGATATCCCCTTGTCCGCGGTTGTGCGGCATTGGGATATTTTATAATTTTCTTGTTACAAGTGAGGAGGATTTCTTATCCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20699.p1 GENE.S_Transcript_20699~~S_Transcript_20699.p1 ORF type:5prime_partial len:163 (+),score=18.41,zf-RVT|PF13966.2|2e-07,zf-RVT|PF13966.2|1.6e+03 S_Transcript_20699:3-491(+)
LDRVNTHDVLQRRFPRWCLSPGVCVMCRRENETTSHLFLTCDVAQGLWGRLFGVRGENWVCPPTIPHLLLGRHVGFGRGKDQSLLWHGAMMAMLWSIWLERNARIFHGVITPLLLFGIGCCIRPLYGPGRLELLVISPCPRLCGIGIFYNFLVTSEEDFLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST