Transcript Information: S_Transcript_20701.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.877258662184
Replicate 213.344429167852
Replicate 312.121637022689
Condition 2: 8 Hour
Replicate 115.392116398253
Replicate 214.253032601116
Replicate 314.611669729221
Condition 3: 24 Hour
Replicate 115.943241579829
Replicate 214.98735926823
Replicate 312.102513242777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20701.p1 GENE.S_Transcript_20701~~S_Transcript_20701.p1 ORF type:5prime_partial len:248 (+),score=29.51,zf-RVT|PF13966.2|2.6e-18,zf-RVT|PF13966.2|6.8e+03 S_Transcript_20701:1-744(+)
ATTCTCTCCTTCTTCAATACACACCAGAATAGCTGGGACCTTCATCTTCGAAGGGATCCTTTCGATTGGGAAGTTGATGAGCTGGTTTCCCTTGTGAGTCTTTTGGATTCTATCCATCTCAGGGGCGGAGTGGATTCTAGAACTTGGCTGGGGGATTCCTCTGGAATGTTCTCTTGTAAGTCTTTTCTTCGCCAGCTCGATTCTTTCCCTAATCGTTCTCTTTTCTCTGCGGCCTCTGTTATTTGGAAGTCCAAAGTGCCTTCTAAGGTGCGTGCGTTTTTGTGGACAGTGGTCTTGGACCGGGCTAATACTCATGATGTTTTGCAGCGTCGCTACCCGCACTGGTCTATCTCTCCAGGTGTTTGTGTTATGTGTCGAAAGGAAAATGAGACTGCTTCTCATCTCTTTTTGACTTGCGATGTGGCGCAAGGTTTATGGCGTCGGCTCTTTGGGGTTAGGGGAGATAGCTGGGTTTGCCCACCGGATGTGTCTAGCCTTCTGTTGTGCCATTATGTGGGCTTCGGGAGAGGCAAGGATCGGCTTTTGTTATGGCGCGGTGCTATGGTGGCTGTGCTATGGAGTATTTGGTTGGAGAGGAATGCAAGGATTTTCCATGGGGTGATAACCCCTCCTGCTTTTGTTTGGGATAAAGTGGTGTATAGGGCTGCTTCATGGGCCCGGGCCTTTGGAGCTTTCCGTGAAATTCCTCTGTCCGCGCTTGTGCGACATTGGGATATTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20701.p1 GENE.S_Transcript_20701~~S_Transcript_20701.p1 ORF type:5prime_partial len:248 (+),score=29.51,zf-RVT|PF13966.2|2.6e-18,zf-RVT|PF13966.2|6.8e+03 S_Transcript_20701:1-744(+)
ILSFFNTHQNSWDLHLRRDPFDWEVDELVSLVSLLDSIHLRGGVDSRTWLGDSSGMFSCKSFLRQLDSFPNRSLFSAASVIWKSKVPSKVRAFLWTVVLDRANTHDVLQRRYPHWSISPGVCVMCRKENETASHLFLTCDVAQGLWRRLFGVRGDSWVCPPDVSSLLLCHYVGFGRGKDRLLLWRGAMVAVLWSIWLERNARIFHGVITPPAFVWDKVVYRAASWARAFGAFREIPLSALVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST