Transcript Information: S_Transcript_20706.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1896773168187
Replicate 22.6531202632454
Replicate 31.2839879551874
Condition 2: 8 Hour
Replicate 11.6196498975038
Replicate 22.2655036597191
Replicate 31.2141938509167
Condition 3: 24 Hour
Replicate 11.9356225877742
Replicate 22.0081858358789
Replicate 31.436698731937


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20706.p1 GENE.S_Transcript_20706~~S_Transcript_20706.p1 ORF type:5prime_partial len:158 (+),score=9.33,zf-RVT|PF13966.2|1.2e-07,zf-RVT|PF13966.2|1.5e+03 S_Transcript_20706:3-476(+)
TTGGATAGAGTTAATACTCATGATGTTCTGCAGAGACGTTTCCCGCGGTGGTGCCTCTCTCCTGGAGTTTGTGTTATGTGTCGAAGAGAGAACGAGACCATTCCTCATCTCTTCCTGACCTGCGATGTGGCGCAAGGGCTATGGTATAGGCTTTTTGGGGTGAGGGGAGAAAGTTGGGTGTGTCCATCAAATATTTCTCATCTTTTGTTGGGACATCAGGTGGGCTTTGGGAGAGGAAAGGATCAAAGCTTGTTGTGGCATGGTGCTATGATGGCTATGCTTTGGAGTATTTGGCTAGAGAGGAATGCAAGGATTTTCCATGGGGTGATAACCCCCCTGTTTTTGTTTGGGATAAGGTGTTGTATAAGGCCTCTCTATGGGCCCGGGCTTTTGGAGCTTTTAGTGATATCCCCTTGTCCGCGGTTGTGCGGCATTGGGATATCTTATAATTTTTCTAGTTATTTTTTGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20706.p1 GENE.S_Transcript_20706~~S_Transcript_20706.p1 ORF type:5prime_partial len:158 (+),score=9.33,zf-RVT|PF13966.2|1.2e-07,zf-RVT|PF13966.2|1.5e+03 S_Transcript_20706:3-476(+)
LDRVNTHDVLQRRFPRWCLSPGVCVMCRRENETIPHLFLTCDVAQGLWYRLFGVRGESWVCPSNISHLLLGHQVGFGRGKDQSLLWHGAMMAMLWSIWLERNARIFHGVITPLFLFGIRCCIRPLYGPGLLELLVISPCPRLCGIGISYNFSSYFLF*

Click here to download the sequence:
Link to NCBI Protein BLAST