Transcript Information: S_Transcript_207378.p1


Annotated TAIR IDAT5G49050.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19883929-19884381 | Forward length=150
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2333552902556
Replicate 22.4743315391605
Replicate 32.9301543310393
Condition 2: 8 Hour
Replicate 13.9860542648847
Replicate 23.3453231610806
Replicate 31.9921352901852
Condition 3: 24 Hour
Replicate 15.103944740793
Replicate 22.3299245545778
Replicate 33.064360535201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_207378.p1 GENE.S_Transcript_207378~~S_Transcript_207378.p1 ORF type:5prime_partial len:107 (+),score=7.36 S_Transcript_207378:3-323(+)
CTTGGCATGGCTGGCCCTGCTGGAACAGTAGACTTCTTACCAAATGTGCAATCAGAATTGAAGAAAATTGCATCTAGGGTCACCGAGAAGGCCAAGGAGTTGTGCTGCTCTAAAATGGTACTAGTATTTAACTTTCTTGTGTCTGTAGACTCTGTACATTCAAATACTCAATGTTATAGTTACAGATCGTTATTTTGTTTGATTTGCCCTTCGATTTTGTTGGCCCATGGAACTTTGTCAGTGCAAATGTTTATCAGTTTAACCACACAAAATTTCATTGTGACATTTCTACCCAAACACTGGCCTTGGTGCTATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_207378.p1 GENE.S_Transcript_207378~~S_Transcript_207378.p1 ORF type:5prime_partial len:107 (+),score=7.36 S_Transcript_207378:3-323(+)
LGMAGPAGTVDFLPNVQSELKKIASRVTEKAKELCCSKMVLVFNFLVSVDSVHSNTQCYSYRSLFCLICPSILLAHGTLSVQMFISLTTQNFIVTFLPKHWPWCYV*

Click here to download the sequence:
Link to NCBI Protein BLAST