Transcript Information: S_Transcript_207380.p1


Annotated TAIR IDAT5G49050.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19883929-19884381 | Forward length=150
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 25.5156973893787
Replicate 39.6604808056955
Condition 2: 8 Hour
Replicate 14.8236001907801
Replicate 25.060299097081
Replicate 32.7913609958904
Condition 3: 24 Hour
Replicate 19.1020347877476
Replicate 27.2847965781117
Replicate 39.3081354352214


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_207380.p1 GENE.S_Transcript_207380~~S_Transcript_207380.p1 ORF type:5prime_partial len:84 (+),score=12.60 S_Transcript_207380:3-254(+)
CTTGGCATGGCTGGCCCTGCTGGAACAGTAGACTTCTTACCAAATGTGCAATCAGAATTGAAGAAAATTGCATCTAGGGTCACCGAGAAGGCCAAGGAGTTATGCTGTTCTAAAATGGTTTGTGTATTTAAATTTCTTGCTTCTGTACATTCAAATACTTATATCATAGTTACAAATTGTTATTTCATTTCATCTGCCCTTCCATTGTCTTGCCCCATAGAACTTTGTCAGAGCATATGTTTATCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_207380.p1 GENE.S_Transcript_207380~~S_Transcript_207380.p1 ORF type:5prime_partial len:84 (+),score=12.60 S_Transcript_207380:3-254(+)
LGMAGPAGTVDFLPNVQSELKKIASRVTEKAKELCCSKMVCVFKFLASVHSNTYIIVTNCYFISSALPLSCPIELCQSICLSV*

Click here to download the sequence:
Link to NCBI Protein BLAST