Transcript Information: S_Transcript_207588.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 20.88251158230059
Replicate 30.63232238000916
Condition 2: 8 Hour
Replicate 10.6092968662038
Replicate 21.2783913508415
Replicate 30.36541453037111
Condition 3: 24 Hour
Replicate 11.7475906792475
Replicate 20.77704496833191
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_207588.p1 GENE.S_Transcript_207588~~S_Transcript_207588.p1 ORF type:internal len:175 (-),score=26.42,RVT_1|PF00078.23|3.6e-33 S_Transcript_207588:2-523(-)
GTGCGAGATTTTAGACCTATTAGCTTGGTGACGAGTGTCTATAAGGTTATCTCTAAAGTTTTGTCCGCTCGTATTAGTATAGTGTTGGATGAGACCATCTCTAAGGCCCAGAGCGCTTTTGTGGGAGAGCGTCAGATCCTAGATGCGTCCCTGGTGGCTAACGAGGTAGTTGATGATGCTAGGAGAACAGGTTTCAAGGGGGTTGTTTTTAAGCTAGACTTTGAGAAAGCTTATGATAGGGTGTCTTGGGGTTTTCTGGATAGGGTGATGGAGGCTAAGGGTTTTGGTGAGCGGTGGCGTAAGTGGATTCGGGGCTGCTTTAGCAATGCCAGTTTCTCGGTGTTAGTCAATGGGGCCCCCAGGGGTTGGTTTTCTTCTTCCCGGGGCTTGAGGCAGGGGGATCCTCTTTCACCTTTCCTTTTTACTTTGGTGGTGGACGTCTTGAGTCGTATGATAGATAGGGGGGTGGAGGTAGGGGAAGTGGAGTGTTTTAGGGTCGGGAGGGAAGGTGTTTCTGTTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_207588.p1 GENE.S_Transcript_207588~~S_Transcript_207588.p1 ORF type:internal len:175 (-),score=26.42,RVT_1|PF00078.23|3.6e-33 S_Transcript_207588:2-523(-)
VRDFRPISLVTSVYKVISKVLSARISIVLDETISKAQSAFVGERQILDASLVANEVVDDARRTGFKGVVFKLDFEKAYDRVSWGFLDRVMEAKGFGERWRKWIRGCFSNASFSVLVNGAPRGWFSSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGEVECFRVGREGVSVS

Click here to download the sequence:
Link to NCBI Protein BLAST