Transcript Information: S_Transcript_207776.p1


Annotated TAIR IDAT1G48790.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 1
Annotated Gene Symbol(s)AMSH1
Annotation TypeHomolog
Chromosome Positionchr1:18043925-18047427 | Reverse length=507
E-Value1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6662966521096
Replicate 25.9015692232036
Replicate 38.1967715927114
Condition 2: 8 Hour
Replicate 111.057609794069
Replicate 212.428804799848
Replicate 311.842137558323
Condition 3: 24 Hour
Replicate 18.4502841486249
Replicate 28.580537716148
Replicate 36.8504318137352


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_207776.p1 GENE.S_Transcript_207776~~S_Transcript_207776.p1 ORF type:internal len:243 (-),score=48.96 S_Transcript_207776:2-727(-)
CCTGCCAGTAACATGTGGTCTTCAACGAATAATCAATCAACTAAGGCATCATGGAAAATTTCAGGGGATTTGCCTAGGGCTCAGCACAAATTGAATGGTGTGCCTGTGGATGAGACATTTCGCAGACTTTCCCTAAACTTCCCTCGTCCAAAGGAGGAAACTCTGTCGAAACATTCTATTCTGGGGCCAAAAGGACTTTCTGGGCAGTGGCAACCACCTGTCAGTAGTAAAGGGGTCTGGTACCCTAGTGATATTGATCTGACTCCTGTTGAGATCCCGAGGATCCAAGAAATCGTGAGTGGTGAAGATGGAGTAGCAATAAGAAAAGATGATAGCGCCTTAGATTCTGAAAAGCCAAGATTGGAGCAGATCGTTGAACGTAATGAAGATAGTCAGAAGCCACAAACTAATGAGCAGCCCATGATTTCATTTGAATGTTCCGATCCACCAGATACAGTTATCTGCAAGCAACCTACCCCTCCAGCTGTACTTGCAGAGGTCCATGACCTGATACCTGCAGAGGCAGCAGTAGCTATGGAGAAACAAGATATACCAGATAGTTCTCTGCAAGATGGTTTGCTTTGTGAAGAATCACCTATGGAGCTACATATCTCAACTAGTATGATGGATACCTTCATGAGGCTGGCGAAATCTAACACTGTTAAAAATTTGGAAACATGTGGAATTCTTGCCGGTTCACTTAAGAATAGGAAGTTCTATATTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_207776.p1 GENE.S_Transcript_207776~~S_Transcript_207776.p1 ORF type:internal len:243 (-),score=48.96 S_Transcript_207776:2-727(-)
PASNMWSSTNNQSTKASWKISGDLPRAQHKLNGVPVDETFRRLSLNFPRPKEETLSKHSILGPKGLSGQWQPPVSSKGVWYPSDIDLTPVEIPRIQEIVSGEDGVAIRKDDSALDSEKPRLEQIVERNEDSQKPQTNEQPMISFECSDPPDTVICKQPTPPAVLAEVHDLIPAEAAVAMEKQDIPDSSLQDGLLCEESPMELHISTSMMDTFMRLAKSNTVKNLETCGILAGSLKNRKFYIT

Click here to download the sequence:
Link to NCBI Protein BLAST