Transcript Information: S_Transcript_20796.p1


Annotated TAIR IDAT2G21340.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9132629-9136236 | Forward length=559
E-Value5.3E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1713468853513
Replicate 20.66032996915097
Replicate 30.51951369249579
Condition 2: 8 Hour
Replicate 10.97616223282651
Replicate 20.82712820675046
Replicate 30.41280690784295
Condition 3: 24 Hour
Replicate 12.1537209075234
Replicate 20.71821938094059
Replicate 30.39964506979937


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20796.p1 GENE.S_Transcript_20796~~S_Transcript_20796.p1 ORF type:complete len:568 (+),score=94.82,MatE|PF01554.14|1.4e-12,MatE|PF01554.14|0.0047,Polysacc_synt_C|PF14667.2|1.4e+02,Polysacc_synt_C|PF14667.2|8.9e-06,Polysacc_synt_C|PF14667.2|2e+03,Polysacc_synt_C|PF14667.2|1.1e+03 S_Transcript_20796:168-1871(+)
ATGCAATTCAAAGCCATGAATTTCTCATCCCCTCACCTTCAACTCAAACCCCCAATACTCACCAAACACCCCTCTTTCTCCTTTCTCACCTCCCCCTTCAACTTCAACCACTCTAAAACCTCTCATTTTCAGCCTATTACCTACAAAACCCCTCTCAATTTACACATTTCCAAACCGCACTTAGCAACACCTCCTCATTGCATTAGCCCCCACCACCAAGAACATGACCTCCTTGAAGAAGAGACCCATGACCCAGAACCTGAAACCCAAATCGAAAATGAAAAAAGCCAGCAACTTTCTTCAGAAAAGCCTGATTCAATGGACCCCGCAAGTGGGAATTTGGCTAATCAAACCATATGGGAACAAATGGTTGAGATTGTCAAGTTCTCTGGGCCTGCTACTGGGCTTTGGATTTGTGGGCCTTTGATGAGTCTCATTGATACTGCTGTTATTGGTCAGGGTAGCTCCATTGAGCTTGCTGCCTTAGGTCCAGGAACTGTGCTGTGTGATTATGTGGGCTTTGTGTTTATGTTTCTTTCAGTTGCCACTTCAAACATGGTTGCTACTTCACTTGCTAGAAAGGATGAGAATCAAGTGCAGCATCAAATATCTATATTGTTGTTTGTAGGTTTGGTTAGTGGAGTGCTGATGCTTGTTTTGACAAAATTGCTCGGTGTATGGGCTTTAACTGCTTTTGTTGGACCAAAGAATACACACCTGGTGCCTGCTGGAAACTCATATATTCAGATTCGTGCCCTGGCATGGCCAGTTATTCTTGTTGGAAGTGTTGCCCAGAGTGCCAGTTTGGGCATGAAGGATTCCCTGGGACCATTGAAGTCGTTATTGATTGCCAGCACAATCAACTTCTTTGGTGATATAGTTTTGTGTACTTTCCTAGGCTTTGGGATTGCCGGTGCAGCATGGGCAACTGCGGCGTCACAAGTTGTTGCTGCTTATACGATGATTGATGCCTTGAATAGAAAAGGCTATAATGGGTTTTCTCTTGCTATCCCATCACTTACCGAACTTAAAGAAATACTCGCAATTGCTGCCCCAGTATTTGTAACTATGGTATCAAAGGTGGCCTTCTACTCTCTGATGATTTATTTTGCTACATCTATGGGAACACATACAATAGCTGCCCACCAGGTCCTGTCTCAAATATTCAGCATGTGCTCGGTATGGGGTGAGCCCCTTTCACAGACTGCGCAATCATTTATGCCAGAGCTTCTATATGGTGTTAACCGAAGTTTGGTGAAGGCCCGAGGTCTTCTGAAATCTCTTTTGATAATTGGAGCATCTGTTGGACTTGTTCTAGGAACTGTTGCAACATCCATTCCTTGGCTGTTTCCCAAGGTTTTCACACCTGATCTTGCAGTCATAGCGGAGATGCAAAAAGTTTGGATTCCATTCTTCCTTGCACTATGTGTGACTCCTTGTATACATTGCTGTGAGGGAACTCTATTGGCTGGAAGGGATCTCAAATATATTAGTTCATCAATGACTGGATGCTTTGTTTTGGGCGCACTTGCATTGCTGCTCGTGAGAAGTCAAGGATTAGGATTGATAGGCTGCTGGAGTGCCCTCATTGGGTTCCAATGGGCACGATTCTTTCTTGCTTTAAGCCGCCTCATCTCCCCAAGGGGTGTGCTATTTTCAGAGGATCCAGCTCATTATAGATTGTCGGAGCTTAAAGCTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20796.p1 GENE.S_Transcript_20796~~S_Transcript_20796.p1 ORF type:complete len:568 (+),score=94.82,MatE|PF01554.14|1.4e-12,MatE|PF01554.14|0.0047,Polysacc_synt_C|PF14667.2|1.4e+02,Polysacc_synt_C|PF14667.2|8.9e-06,Polysacc_synt_C|PF14667.2|2e+03,Polysacc_synt_C|PF14667.2|1.1e+03 S_Transcript_20796:168-1871(+)
MQFKAMNFSSPHLQLKPPILTKHPSFSFLTSPFNFNHSKTSHFQPITYKTPLNLHISKPHLATPPHCISPHHQEHDLLEEETHDPEPETQIENEKSQQLSSEKPDSMDPASGNLANQTIWEQMVEIVKFSGPATGLWICGPLMSLIDTAVIGQGSSIELAALGPGTVLCDYVGFVFMFLSVATSNMVATSLARKDENQVQHQISILLFVGLVSGVLMLVLTKLLGVWALTAFVGPKNTHLVPAGNSYIQIRALAWPVILVGSVAQSASLGMKDSLGPLKSLLIASTINFFGDIVLCTFLGFGIAGAAWATAASQVVAAYTMIDALNRKGYNGFSLAIPSLTELKEILAIAAPVFVTMVSKVAFYSLMIYFATSMGTHTIAAHQVLSQIFSMCSVWGEPLSQTAQSFMPELLYGVNRSLVKARGLLKSLLIIGASVGLVLGTVATSIPWLFPKVFTPDLAVIAEMQKVWIPFFLALCVTPCIHCCEGTLLAGRDLKYISSSMTGCFVLGALALLLVRSQGLGLIGCWSALIGFQWARFFLALSRLISPRGVLFSEDPAHYRLSELKAA*

Click here to download the sequence:
Link to NCBI Protein BLAST