Transcript Information: S_Transcript_208055.p1


Annotated TAIR IDAT3G06840.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2156930-2157624 | Forward length=187
E-Value5.4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3326136540796
Replicate 21.1426942798713
Replicate 30.88172443427572
Condition 2: 8 Hour
Replicate 12.293966289094
Replicate 23.1195804876113
Replicate 33.6517189124072
Condition 3: 24 Hour
Replicate 11.3054711249359
Replicate 20.81264663022759
Replicate 32.8136145153118


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208055.p1 GENE.S_Transcript_208055~~S_Transcript_208055.p1 ORF type:5prime_partial len:251 (+),score=22.58 S_Transcript_208055:3-755(+)
CTAATAACCCCCCTTTTTTTTTTTTTTTACCGTTATTCTCCGCTCATAATCCTTGAGCCCCCCAAACATCTTCATTTCCAATCCTTCCTTTTCTCTCTCCCAATTATCCCCACTTGCCTTCCTGCAAACGTGAGACTCCAGTCCCCAGTGCTCAAATACTCTCATTCTCCCACTGGAAACATCATTTTACCCACCAAAAAAGCAGCTAGAAAGCAAAACATGTCAAGCAAATCCCCTGTTTTCCCAATGCTAGAACCTCAACACTTCAGCGATTACGGTTTCGACCCTCAAATCGACCATTTTCAGGTGTTGGAAGAGGCAAGGAAGAACAAGAAGGAAACAACTAGATCAATCGATACACTCCATTTCAAGCTCCAAAAACCCATCTCCAAAGACGAACTCAAGAAGGGTTCCAAGAAGAAGAGGCGTTGGTGGTGGAAAAACGCCCTCCTCTTCTTCAAGTCCAATTGGGCCGCCCAACACCAACGAGCAAGCCCACTGGACTACCCCAACCACGGTGGTTGTGGATCCATCTCAGGCCCAATTTACTTCACCGAGAGCCTGAGCGGATCCACAACTCCTTACCGGACAGCTAGCAGACCATCATCGGGGCCGCTAGCGGGGACCTTGATGCCATCAAGGAAAGGCGACTTGGAGAATCAGATACCGTACATCAGCCTCAAGGATCTTAACATGGACCAGCAGCATGGGAACATACCTGCCCCTCCCATGCCCGTATATTTTGTTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208055.p1 GENE.S_Transcript_208055~~S_Transcript_208055.p1 ORF type:5prime_partial len:251 (+),score=22.58 S_Transcript_208055:3-755(+)
LITPLFFFFYRYSPLIILEPPKHLHFQSFLFSLPIIPTCLPANVRLQSPVLKYSHSPTGNIILPTKKAARKQNMSSKSPVFPMLEPQHFSDYGFDPQIDHFQVLEEARKNKKETTRSIDTLHFKLQKPISKDELKKGSKKKRRWWWKNALLFFKSNWAAQHQRASPLDYPNHGGCGSISGPIYFTESLSGSTTPYRTASRPSSGPLAGTLMPSRKGDLENQIPYISLKDLNMDQQHGNIPAPPMPVYFVT*

Click here to download the sequence:
Link to NCBI Protein BLAST