Transcript Information: S_Transcript_2081.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value3E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.272535016839
Replicate 288.19668220646
Replicate 323.634024758984
Condition 2: 8 Hour
Replicate 149.864554642778
Replicate 265.126937151204
Replicate 376.2633658756
Condition 3: 24 Hour
Replicate 113.484495981848
Replicate 225.853533205611
Replicate 318.620719202789


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2081.p1 GENE.S_Transcript_2081~~S_Transcript_2081.p1 ORF type:5prime_partial len:405 (+),score=35.52,LRR_8|PF13855.2|0.023,LRR_8|PF13855.2|4.4e-11,LRR_8|PF13855.2|6e-07,LRR_8|PF13855.2|87,LRR_8|PF13855.2|16,LRR_8|PF13855.2|0.019,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|1.1e-05,LRR_4|PF12799.3|3.4e-06,LRR_4|PF12799.3|52,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|0.15,LRR_1|PF00560.29|1.1e+04,LRR_1|PF00560.29|0.71,LRR_1|PF00560.29|0.009,LRR_1|PF00560.29|2,LRR_1|PF00560.29|0.054,LRR_1|PF00560.29|23,LRR_1|PF00560.29|7.2e+02,LRR_1|PF00560.29|6.6e+02,LRR_1|PF00560.29|76,LRR_1|PF00560.29|33,LRRNT_2|PF08263.8|6.2e-09 S_Transcript_2081:1-1215(+)
CCGGGGATACAAACAAAAACCATATCTTTTCTACTAAAAATGCAAGCCATGAAACCCATTTTGGTCCTCCCATTTCTTCTCTTCCTTTTCTTATCTTTCAATCCTACTTCAACTTCAGCTGAGAAATGTGACCCAAATGACAAGAAAGTTCTCCTCCAAATCAAGGCTGATTTCGGAAATGATGAAATTGCTTTCATTGGTTGGGATAAAAACACTGAATGTTGTAGCTGGTTTGGTGTACAATGTAATAGCCACGACCGTGTAAATTCACTTGGAATTCAAATGTCACTCGATGTTTCATACCCCATTTCACCTGCCATTGGGTACCTCCAGTATCTCAAGTCTCTCAGACTCACTTTCTTTTTCAAACTCACCGGTCCAATCCCCGAGTCATTTGCTAGGCTAACCCACCTCAAAAGCCTTGACCTTGGTGGTCAAAACTTGACCGGCCCAATTCCCGCTTTTTTGGGTCAGCTCAAGAAACTCACTCATCTAGACCTCTCCAACAACCAAATCCCTAGTCTAATCCCGTCTTCATTGGACCAACTCACCAGCCTTACTTATCTCGACCTTAGCTTGAACCAACTCACCGGTTCAATCCCAAGCACTCTCGGCCAACTTACCGGCCTAGAGAAACTCGACCTCTCTTCCAACAAACTTTCAGGGCCGATCCCTGCCTCTCTCTCTCATTTGACCAAAGTCAATCGCCTTGACATTCGAGCAAACCAGCTCACTGGTTCAATCCCGGCTAGCTTCGGCTCATTTAAAAACCCTCAAATGCAACTCTTTCTAGGTACAAACCGGTTGTCCGGGCCAATCCCAAAATCAGTCGGCCATGCTAACATAAATCTGTTAGATTTGTCCTTTAACAAGTTCACTGGGGATGCTTCCTTTTTGTTTGGAAGGGACAAAACTGCATTGGAAACCATATACCTTGATGATAATCATTTCCATTTCGATTTCTCGAAGGTGGAATTTCCAATTGGTCTAAGGAACCTTGACATCCGAAACAACCAGATATATGGATCACTTCCGAAACAGCTAGGCCAGTTGCCATTGACGTTCATTGATGTAAGTCACAACCAGCTTTGTGGCCCAATCCCGACCGGCCGGCGTTTGAAACGGTTCATCCCGGACAAATTCACCCACAACAAGTGCTTATGTGGTCTCCCCTTACCACCTTGCAAAGAATTAGAGTTAAACTTGGTGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2081.p1 GENE.S_Transcript_2081~~S_Transcript_2081.p1 ORF type:5prime_partial len:405 (+),score=35.52,LRR_8|PF13855.2|0.023,LRR_8|PF13855.2|4.4e-11,LRR_8|PF13855.2|6e-07,LRR_8|PF13855.2|87,LRR_8|PF13855.2|16,LRR_8|PF13855.2|0.019,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|1.1e-05,LRR_4|PF12799.3|3.4e-06,LRR_4|PF12799.3|52,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|0.15,LRR_1|PF00560.29|1.1e+04,LRR_1|PF00560.29|0.71,LRR_1|PF00560.29|0.009,LRR_1|PF00560.29|2,LRR_1|PF00560.29|0.054,LRR_1|PF00560.29|23,LRR_1|PF00560.29|7.2e+02,LRR_1|PF00560.29|6.6e+02,LRR_1|PF00560.29|76,LRR_1|PF00560.29|33,LRRNT_2|PF08263.8|6.2e-09 S_Transcript_2081:1-1215(+)
PGIQTKTISFLLKMQAMKPILVLPFLLFLFLSFNPTSTSAEKCDPNDKKVLLQIKADFGNDEIAFIGWDKNTECCSWFGVQCNSHDRVNSLGIQMSLDVSYPISPAIGYLQYLKSLRLTFFFKLTGPIPESFARLTHLKSLDLGGQNLTGPIPAFLGQLKKLTHLDLSNNQIPSLIPSSLDQLTSLTYLDLSLNQLTGSIPSTLGQLTGLEKLDLSSNKLSGPIPASLSHLTKVNRLDIRANQLTGSIPASFGSFKNPQMQLFLGTNRLSGPIPKSVGHANINLLDLSFNKFTGDASFLFGRDKTALETIYLDDNHFHFDFSKVEFPIGLRNLDIRNNQIYGSLPKQLGQLPLTFIDVSHNQLCGPIPTGRRLKRFIPDKFTHNKCLCGLPLPPCKELELNLVM*

Click here to download the sequence:
Link to NCBI Protein BLAST