Transcript Information: S_Transcript_208567.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46060963676274
Replicate 20.46671285602435
Replicate 30.49653520225078
Condition 2: 8 Hour
Replicate 10.65616585591178
Replicate 20.60231900183879
Replicate 30.40992014624964
Condition 3: 24 Hour
Replicate 10
Replicate 20.21792126515719
Replicate 30.7275589732245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208567.p1 GENE.S_Transcript_208567~~S_Transcript_208567.p1 ORF type:5prime_partial len:520 (+),score=82.64 S_Transcript_208567:3-1562(+)
AGTTTCAAGTCTATGACACAGTCTCCTAGCAGCAATAGTAATAATAATAATAATGATAATGCTGCTGTCATACATTTTCCTTCTGAGCAACCTGGTAAACTTAGGCATGATTCTTCCGAGCCTGCTTATGAAACGCTTTCGGAGAAAGAGAAGCAGTGTTTGCTGTGGTTGTGTTTGCTTCCTGATTGGGTGGGAATCAGCAGGACAGATTTGATATACATGTGGGATTTAGAGGATGAAGGCCATGAGATGTTAGATAAGCTTATAAATACTGACTTCATTGAGCGTCATGTCTTAGACAAAAAGATGCTCAATGTGTTCAAGATGCGGTCTGATGTTCGGTCCAAGCTGAAGGAATTAGCAGCACAGCAGTCATGGCCCCAGAAAGCGGGGCGATATCAAATCAAGGAAGACTGTTTCGGAGTGATTCACGTTGGTGACAATAATGACAAGCTTGAGCCAGAGGAAACAGGGGAGATTTTGGCGATTCTCAATACTACTGCCAGTGGGGGGAATAGCCTTAATGCTGCAATATTTGATGGGCTCTCTAAGATGAAGAATGTCAAAGTGGTGTACCTTGGACTGTGGAACCATGGCGCGGATAATAACATAGTTGTTGAAGATGATGTTGAGCTCGGGAAAGCGTTGAAGCAGATGGTGCAAATGACATGTTTAAGTCTTCAAGGGGTATCGGGTATAGTACAGTTGCCAGATTTGATTTGCAGGCTGGATAACCTCAGGATCCTAGATTTGAGAGGTTGTAACAATTTAGAGTTACTTCCTCAAGGGATTGGGTCATTGAGGCAGCTCACCCACTTGGACTTGACTGATTGTCACCTACTTTCTTATGTTCCTGATACAATTTTTGACCTGTCTGAAAGAGTGTTGAAGGGGTTCATAATCAATCCCGAGCCAGAAGTACAACAGCAATCACTGACTTCGGTTCAAGGGCCGTCTCTGAGCATGTACAAGGGCCTAGGACAATTTTCGAATATTTTGAGACGGCCCTGTACTTCACCGCGTTCCTGTGATTCACCGCGTTCCTGTGAATTCAGCCACCTGTCAAAACTAAAGAAGCTGAGAAAACTGACAGTTCGGACCAGAAGAATGAATTTTCCAATGAGATCAGATCTTCAGACACTATGTGAATTGCAGGAGCTCAACAATCTGAAGATTACATGGGTGGGCAGTTCAACTGATGCTCCGATTGATGATGGTTTCGGAAAATTTCCCGAAAGTCTACAGAAATTGGAGCTCCAAGCTGTTCCCAGCACTACAGCATCAAACATGCTTGGGCTAATCAGCAACAAAAGATATGGTATTTCCCTTAAGAAACTCTACATAAGAGGAGGATTAATTAGGGACTTGGAGCTGGAGAAGCACAAGTTTTTTCATGTCAAGGAAGTGCGCCTTAGATACTTGCCTAACCTACGCACTAGTTGGCATCAGTTTATACAGTCATTTCCTGACTTAACTCGCTTGGAAATACTTAGATGTCCTAAACTTGTCTTTTTTCCATGTGATGACAACAATGGTGTGTGGGAACACCCAAAGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208567.p1 GENE.S_Transcript_208567~~S_Transcript_208567.p1 ORF type:5prime_partial len:520 (+),score=82.64 S_Transcript_208567:3-1562(+)
SFKSMTQSPSSNSNNNNNDNAAVIHFPSEQPGKLRHDSSEPAYETLSEKEKQCLLWLCLLPDWVGISRTDLIYMWDLEDEGHEMLDKLINTDFIERHVLDKKMLNVFKMRSDVRSKLKELAAQQSWPQKAGRYQIKEDCFGVIHVGDNNDKLEPEETGEILAILNTTASGGNSLNAAIFDGLSKMKNVKVVYLGLWNHGADNNIVVEDDVELGKALKQMVQMTCLSLQGVSGIVQLPDLICRLDNLRILDLRGCNNLELLPQGIGSLRQLTHLDLTDCHLLSYVPDTIFDLSERVLKGFIINPEPEVQQQSLTSVQGPSLSMYKGLGQFSNILRRPCTSPRSCDSPRSCEFSHLSKLKKLRKLTVRTRRMNFPMRSDLQTLCELQELNNLKITWVGSSTDAPIDDGFGKFPESLQKLELQAVPSTTASNMLGLISNKRYGISLKKLYIRGGLIRDLELEKHKFFHVKEVRLRYLPNLRTSWHQFIQSFPDLTRLEILRCPKLVFFPCDDNNGVWEHPKT*

Click here to download the sequence:
Link to NCBI Protein BLAST