Transcript Information: S_Transcript_208568.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31162764912389
Replicate 20.51669296387622
Replicate 30.086382838799066
Condition 2: 8 Hour
Replicate 10.44948129474051
Replicate 20.47153779334318
Replicate 30.39936014248209
Condition 3: 24 Hour
Replicate 10.51158977729729
Replicate 20.26538421049587
Replicate 30.17720405905234


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208568.p1 GENE.S_Transcript_208568~~S_Transcript_208568.p1 ORF type:5prime_partial len:427 (+),score=71.82 S_Transcript_208568:3-1283(+)
AGTTTCAAGTCTATGACACAGTCTCCTAGCAGCAATAGTAATAATAATAATAATGATAATGCTGCTGTCATACATTTTCCTTCTGAGCAACCTGGTAAACTTAGGCATGATTCTTCCGAGCCTGCTTATGAAACGCTTTCGGAGAAAGAGAAGCAGTGTTTGCTGTGGTTGTGTTTGCTTCCTGATTGGGTGGGAATCAGCAGGACAGATTTGATATACATGTGGGATTTAGAGGATGAAGGCCATGAGATGTTAGATAAGCTTATAAATACTGACTTCATTGAGCGTCATGTCTTAGACAAAAAGATGCTCAATGTGTTCAAGATGCGGTCTGATGTTCGGTCCAAGCTGAAGGAATTAGCAGCACAGCAGTCATGGCCCCAGAAAGCGGGGCGATATCAAATCAAGGAAGACTGTTTCGGAGTGATTCACGTTGGTGACAATAATGACAAGCTTGAGCCAGAGGAAACAGGGGAGATTTTGGCGATTCTCAATACTACTGCCAGTGGGGGGAATAGCCTTAATGCTGCAATATTTGATGGGCTCTCTAAGATGAAGAATGTCAAAGTGGTGTACCTTGGACTGTGGAACCATGACGCGGATGATAACATTGTTGTTGAAGATGATGTTGACCTCGGGAAAGCGTTGAAGCAGATGGTGCAAATGACATGTTTAAGTCTTCAAGGGGTATCGGGGATAGTACAGTTGCCAGATTCGATTTGCAGGCTGGATAAGCTCAGGATCCTAGATTTGAGAGGTTGTAACAATTTAGAGTTACTTCCTCAAGGGATTGGGTCATTGAGGCAGCTCACCCACTTGGACTTGACTGATTGTCACCTACTTTCTTATGTTCCTGATACAATTTTTGACCTGTCTGAAAGAGTGTTGAAGGGGTTCATAATCAATCCCGAGACAGAAGTACAACAGCAATCCCTGGCTTCGGTTCCAGGACCGTCTCTGAGTATGTACAAGCAATTTTCGAAAATTTTGAGACGGCCCTGTACTTCACCGCGTTCCTGTGATTCACCGCGTTCCTGTGAATTCAGCCACCTGTCAAAACTAAAGAAGCTGAGAAAACTGACAGTTCGGACCAGAAGAATGAATTTTCCAATGAGATCAGATCTTCAGACACTATGTGAATTGCAGGAGCTCAACAATCTGAAGATTACATGGGTGGGCAGTTCAACTGATGCTCCAACTTCGGAAAATTTCCCGAAAGTGTACAGAAATTGGAGCTCCAAGCTGTTCCCAGCACTACAGCATCAAACTTGCTTGGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208568.p1 GENE.S_Transcript_208568~~S_Transcript_208568.p1 ORF type:5prime_partial len:427 (+),score=71.82 S_Transcript_208568:3-1283(+)
SFKSMTQSPSSNSNNNNNDNAAVIHFPSEQPGKLRHDSSEPAYETLSEKEKQCLLWLCLLPDWVGISRTDLIYMWDLEDEGHEMLDKLINTDFIERHVLDKKMLNVFKMRSDVRSKLKELAAQQSWPQKAGRYQIKEDCFGVIHVGDNNDKLEPEETGEILAILNTTASGGNSLNAAIFDGLSKMKNVKVVYLGLWNHDADDNIVVEDDVDLGKALKQMVQMTCLSLQGVSGIVQLPDSICRLDKLRILDLRGCNNLELLPQGIGSLRQLTHLDLTDCHLLSYVPDTIFDLSERVLKGFIINPETEVQQQSLASVPGPSLSMYKQFSKILRRPCTSPRSCDSPRSCEFSHLSKLKKLRKLTVRTRRMNFPMRSDLQTLCELQELNNLKITWVGSSTDAPTSENFPKVYRNWSSKLFPALQHQTCLG*

Click here to download the sequence:
Link to NCBI Protein BLAST