Transcript Information: S_Transcript_208671.p1


Annotated TAIR IDAT1G20230.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7009570-7011852 | Forward length=760
E-Value1E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60598864292631
Replicate 20.29305413074498
Replicate 30.52493556215182
Condition 2: 8 Hour
Replicate 12.0232818137697
Replicate 23.0564954498298
Replicate 32.9122220636787
Condition 3: 24 Hour
Replicate 10.24870835093656
Replicate 20.34404268047586
Replicate 30.71789500204315


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208671.p1 GENE.S_Transcript_208671~~S_Transcript_208671.p1 ORF type:internal len:527 (+),score=90.38,PPR_2|PF13041.2|0.0083,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|9e-12,PPR_2|PF13041.2|9.2e-11,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|8.4e+02,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|2.8,PPR|PF01535.16|6.5e+03,PPR|PF01535.16|0.0095,PPR|PF01535.16|12,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|20,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|2.4e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|56,PPR_1|PF12854.3|4.2e-09,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|29,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|8.8e-06,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.0086,PPR_3|PF13812.2|57 S_Transcript_208671:3-1580(+)
GACCAAGCTACAATGTCACTCACTCCCTTGCATTTGCAGTCTTGTACCATTAAATTGTTCAAATTTCTTCTTTCCCGCGTTCATTTTCACGTTCGTATGTCCCAGATTACTGATAAACTAACTGATAATATATTAGCAAACTTTATAAATGGAGTACTACTCATACTATACATACATGATCTGCAAATAGTAATGCCATATATGATGGCAAACAAAGCCATTTTCAGAATAAGCAGAACAACCTTATCAATCCCTACCATTCTCAACTCAGCAACAACATCTTCTACTCACACTCGTCAAGCACATGCTTACATTCTCAAAACCGGTCTTCTCATTGACATTTCTTTTTCCTCAAAGCTACTATCTTTATACGCCAATCATCAATGTTTCAATGAAGCAACCCTTTTTCTTGACTCAATTGACCAACCCACTTCATCGTTTTTCTCAATCATCATCAATGCACTGTCAAAATCCAAACTTTCTAACAGTGTCCTTACAATGTTCTCTAAAATGGTGTCAAAGGGTGTTTTCCCGGATGGGTATCTCTTGCCTGCTGCTGCCAAGGCTTGTGCCGGGCTTTCGGCCCTTGAACTTGGCAGGCAGGTTCATGGCATTGTTGAGACATCTGGGTATTCATTGGATAACGTTGTTCAATCATCTTTGGCTCATATGTATGTCAAATGTGGTCGGTTGAGTGTTGCACACAAGGTGCTCGACAAAATTCCTGCACCAGATGTTGTTACCTTTAGTGCTTTGATTGCGGGTTATGCTAGAAATGGAGACGTGGGTATGGCTAACAAGTTGTTCAATGACATGGAGGAATTGGGTTTGGAGCCAAATTTGGTTTCTTGGAATGGTTTGATAGCTGGGTTTAATCAAAGTGGGAGGTACTTGGAGGCTATCAATGTCTTTCGAGATATGCATTCGTGGGGTTTTCAGCCTGATGGGAGTAGTTTCTCTAGTGTTTTGGCGGCGATTGCGGATTTGGAGTTGTTAAATGTGGGAGTTCAGGTTCATAGTTATGTGATCAAGAGGGGGCTGGTTTCTGACAAGTGGGTTGTGAGTTCTTTCATTGATATGTATGGGAAGTGTGCATGCATATCGGAGATGAAACAAGCTTTTGATGATATGGGTTGTATGGAAATAGGTTCATGTAATGCCTTAGTTACTGGGCTTGCAAGGAATGGTCTGATTGATGATGCATTGCTAGTGTTTAGTCGGATGAGAGAGCAAGGGATGGACATGAATGTTGTCTCTTGGACATCGATGATTGCTTGTTGCTCACAGAATGGGAAAGATGTTGAGGCTTTGAAGCTTTTTACGGATATGCAGTTTGCAGGTGTGGAGCCTAATGCTGTAACCATCCCTTGCTTGCTGCCAGCATGTGGCAATATTGCAGCATTGATGCATGGGAAGGCAGCACATTGTTTCTCTATACGAAGGGGAATAGTGCATGATGTCTTTGTTGGAAGTGCTCTCATTGACATGTATGCAAAATGTGGCAAAATCAGGGATTCCAAGCTGTGTTTCGACACAATGCCTACCAGAAACTTGGTAACATGGAATGTGATAATTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208671.p1 GENE.S_Transcript_208671~~S_Transcript_208671.p1 ORF type:internal len:527 (+),score=90.38,PPR_2|PF13041.2|0.0083,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|9e-12,PPR_2|PF13041.2|9.2e-11,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|8.4e+02,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|2.8,PPR|PF01535.16|6.5e+03,PPR|PF01535.16|0.0095,PPR|PF01535.16|12,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|20,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|2.4e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|56,PPR_1|PF12854.3|4.2e-09,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|29,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|8.8e-06,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.0086,PPR_3|PF13812.2|57 S_Transcript_208671:3-1580(+)
DQATMSLTPLHLQSCTIKLFKFLLSRVHFHVRMSQITDKLTDNILANFINGVLLILYIHDLQIVMPYMMANKAIFRISRTTLSIPTILNSATTSSTHTRQAHAYILKTGLLIDISFSSKLLSLYANHQCFNEATLFLDSIDQPTSSFFSIIINALSKSKLSNSVLTMFSKMVSKGVFPDGYLLPAAAKACAGLSALELGRQVHGIVETSGYSLDNVVQSSLAHMYVKCGRLSVAHKVLDKIPAPDVVTFSALIAGYARNGDVGMANKLFNDMEELGLEPNLVSWNGLIAGFNQSGRYLEAINVFRDMHSWGFQPDGSSFSSVLAAIADLELLNVGVQVHSYVIKRGLVSDKWVVSSFIDMYGKCACISEMKQAFDDMGCMEIGSCNALVTGLARNGLIDDALLVFSRMREQGMDMNVVSWTSMIACCSQNGKDVEALKLFTDMQFAGVEPNAVTIPCLLPACGNIAALMHGKAAHCFSIRRGIVHDVFVGSALIDMYAKCGKIRDSKLCFDTMPTRNLVTWNVIIG

Click here to download the sequence:
Link to NCBI Protein BLAST