Transcript Information: S_Transcript_208754.p1


Annotated TAIR IDAT5G03800.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB175, emb1899, EMB166
Annotation TypeHomolog
Chromosome Positionchr5:1010894-1013584 | Reverse length=896
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2235862636865
Replicate 20.76078584681086
Replicate 30.63595641667588
Condition 2: 8 Hour
Replicate 13.1865525761233
Replicate 22.3143291696269
Replicate 30.73502922775798
Condition 3: 24 Hour
Replicate 12.0087249186753
Replicate 21.563021488024
Replicate 30.28990855638064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208754.p1 GENE.S_Transcript_208754~~S_Transcript_208754.p1 ORF type:internal len:87 (+),score=18.65,PPR|PF01535.16|0.075,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.0011,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.00053 S_Transcript_208754:3-260(+)
GCTGAAATACAGGGCAAGGAAATTCATGGTCATGCGCTAAAGGCTGGGTTTGAGGGTAATTTGAGCATCAATAACGCACTCATTAGCTTTTACACAAAGTGTGGGGGTGCTAAGAATGTGCAGGCTTTGTTTGAGAGAATGCCTACGAAGGATGTCATTTCTTGGACTGGTATGGTTACTGCTTACATGAAGTTTGGAATGGTGGAGCGAGCTGTCGAGACATTTAGCATGATGCCGGATAGAAATCCTGTCTCTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208754.p1 GENE.S_Transcript_208754~~S_Transcript_208754.p1 ORF type:internal len:87 (+),score=18.65,PPR|PF01535.16|0.075,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.0011,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.00053 S_Transcript_208754:3-260(+)
AEIQGKEIHGHALKAGFEGNLSINNALISFYTKCGGAKNVQALFERMPTKDVISWTGMVTAYMKFGMVERAVETFSMMPDRNPVSF

Click here to download the sequence:
Link to NCBI Protein BLAST