Transcript Information: S_Transcript_208808.p1


Annotated TAIR IDAT5G37590.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14927403-14932709 | Reverse length=551
E-Value6.7E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2096929226558
Replicate 24.2119870973437
Replicate 34.5268534023383
Condition 2: 8 Hour
Replicate 13.528382761562
Replicate 24.0676088435867
Replicate 34.2631695209963
Condition 3: 24 Hour
Replicate 16.0371314374006
Replicate 25.068452407074
Replicate 34.7234010431399


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_208808.p1 GENE.S_Transcript_208808~~S_Transcript_208808.p1 ORF type:complete len:550 (+),score=115.88,TPR_12|PF13424.2|1.1,TPR_12|PF13424.2|1.2e-14,TPR_12|PF13424.2|6e-12,TPR_12|PF13424.2|3.8e+02,TPR_12|PF13424.2|6.7e-05,TPR_12|PF13424.2|2.3e+03,TPR_10|PF13374.2|14,TPR_10|PF13374.2|4.6e-07,TPR_10|PF13374.2|0.00043,TPR_10|PF13374.2|8.1,TPR_10|PF13374.2|51,TPR_10|PF13374.2|6.7e-05,TPR_10|PF13374.2|1.8e+03,TPR_11|PF13414.2|0.013,TPR_11|PF13414.2|9.3e-06,TPR_11|PF13414.2|0.68,TPR_11|PF13414.2|9,TPR_11|PF13414.2|1.7e+02,TPR_2|PF07719.13|6.8,TPR_2|PF07719.13|0.42,TPR_2|PF07719.13|0.0063,TPR_2|PF07719.13|5.2,TPR_2|PF07719.13|8.2e+03,TPR_2|PF07719.13|53,TPR_2|PF07719.13|1.1e+04,TPR_1|PF00515.24|6.5,TPR_1|PF00515.24|0.076,TPR_1|PF00515.24|0.0097,TPR_1|PF00515.24|14,TPR_1|PF00515.24|1.8e+02,TPR_8|PF13181.2|7.3e+02,TPR_8|PF13181.2|0.51,TPR_8|PF13181.2|1,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|93,TPR_8|PF13181.2|0.15,TPR_8|PF13181.2|9.9e+03,TPR_8|PF13181.2|5.5e+03,TPR_16|PF13432.2|0.037,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|4.4e+02,TPR_16|PF13432.2|4.5e+03,TPR_7|PF13176.2|9.1e+02,TPR_7|PF13176.2|6.2,TPR_7|PF13176.2|1.2,TPR_7|PF13176.2|4.6e+02,TPR_7|PF13176.2|7.6,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|6.9e+02 S_Transcript_208808:207-1856(+)
ATGTTTATTCGTCAGGCAACGGCTTCTTTGCTCAAGCGACTTCGTTCCTCATCCAAATATGGGTATTCCTTTTTTCAAAGAGCAACGACCCATACACCTTCATGTAATAGAATCTATTCTTCTCATTGTAGCTTGGAACATTTCCAAGGGCAACCTAGAAGCTTCACATGGATCTTGCTATATGGTCAAGCAGCACTTATCGTGGGTGGTGGATATGCTCCTGTCATTGCTGAAGGCATGTCTAGTGTAAATTCTGAAAATGATGCTTCAGGATCAAGCAGTATTGGTTTACAGCAAGTGGAGGATGGTTCAATTATATCAAATGAACATACAATAAAGTGGCGAATATACACTGCTAACGGGAAAGATTATCTTATGCAGGGAAAATCAAAGGAAGCAGAGAGGTTCTTCATATCTGCGTTGGAGGAGGCCAAAAAAGGTTTTGGTGAGCGTGATCCACATGTTGCATCTGCATGCAACAATCTGGCAGAGCTGTATAGAGTAAGAAAAGCATATGATAAATCAGAACCCTTGTATTTGGAGGCCATTAATATCCTAAAGGAGTCTTTTGGTCCCGATGATGTACGTGTTGGTGCTGCTTTTCACAACCTTGGTCAATTCTATATAGTGCAGCGGAAGCTTGAAGAAGCTCAAGGTTGTTATGAGCTGGCTTTGAAGATCAAAGGGCGTGTCTTAGGACATGGTCATGCAGACTATGCAGATACAATGTTTCATCTTGGAATGGTTTCCTATCTTCAAGGAAAGATGGAAGATGCAGAATTCCTTATTCAAGACTCGATCCGGATATTAGAGGAAGGAGGTCAAGGCGAAACATACTCCTGCACTAGGAAATTGCGATATTTGGCTCAGATTTATTCAAAGTCTACTAATCGACTTCAAATGGCTGAAAATGTACAAAGGAAGATTTTGCACATTTTGGAGTTGACCAAGGGATGGAATTCTATGGACACTGTAATTGCTGCTGAAAGCCTCTCTAGGATATTGCAATCCATGGGAAAACTTAGGGAGGCACAAGAAATTTTAGAAAGGTGTCTTGATGCTCGGAGGTTGTTACTTCCTGAAGATCACATTCAGATTGGTGCTAACATGCTTGCCCTTGCAAATGTGGAATTGCTGAGCTCCAAACAAACAAGAGAATTGGCCACATCAGAAGCAACATCAAAGCTGGATAGAGCAAAAGAACTTTTGAAAAGTTCGATCAGAATAGCTCGTGGTGTTGTGGAAGGGGCTAAACAGAAGAAAAATGTTCGGGCTTATGAGCGACTTATTGAGAGCAATGAGCAAACTGCATTGCTTATACTGTTGCAATCACTAAAAGCTCTTGCACTCGTGGAGATGGCTGTGCAGGAAGTACAAGATACAAAGGAAGCTTTGCCTGCGCTTGAGGCTGAAAGTGTCTTACGCAAATGTACATATGTTTTCAAACAGTATGGAGTTAAGACATCAGCTTCTGCATCCATAGAAGTGAAGCGCGAGTATCTTTCATGCTTAAAGTATCTAGTGAACTTAATTACTGATAGTATGTCAAAGAATGCAGAATCTCCCCAGAGAGTAGAAATAAAAGAATTAAATGATGAAATTAAGCTTGTGGAAGCTGAAGTTTCGTCTCACCAAACACGTAAGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_208808.p1 GENE.S_Transcript_208808~~S_Transcript_208808.p1 ORF type:complete len:550 (+),score=115.88,TPR_12|PF13424.2|1.1,TPR_12|PF13424.2|1.2e-14,TPR_12|PF13424.2|6e-12,TPR_12|PF13424.2|3.8e+02,TPR_12|PF13424.2|6.7e-05,TPR_12|PF13424.2|2.3e+03,TPR_10|PF13374.2|14,TPR_10|PF13374.2|4.6e-07,TPR_10|PF13374.2|0.00043,TPR_10|PF13374.2|8.1,TPR_10|PF13374.2|51,TPR_10|PF13374.2|6.7e-05,TPR_10|PF13374.2|1.8e+03,TPR_11|PF13414.2|0.013,TPR_11|PF13414.2|9.3e-06,TPR_11|PF13414.2|0.68,TPR_11|PF13414.2|9,TPR_11|PF13414.2|1.7e+02,TPR_2|PF07719.13|6.8,TPR_2|PF07719.13|0.42,TPR_2|PF07719.13|0.0063,TPR_2|PF07719.13|5.2,TPR_2|PF07719.13|8.2e+03,TPR_2|PF07719.13|53,TPR_2|PF07719.13|1.1e+04,TPR_1|PF00515.24|6.5,TPR_1|PF00515.24|0.076,TPR_1|PF00515.24|0.0097,TPR_1|PF00515.24|14,TPR_1|PF00515.24|1.8e+02,TPR_8|PF13181.2|7.3e+02,TPR_8|PF13181.2|0.51,TPR_8|PF13181.2|1,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|93,TPR_8|PF13181.2|0.15,TPR_8|PF13181.2|9.9e+03,TPR_8|PF13181.2|5.5e+03,TPR_16|PF13432.2|0.037,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|4.4e+02,TPR_16|PF13432.2|4.5e+03,TPR_7|PF13176.2|9.1e+02,TPR_7|PF13176.2|6.2,TPR_7|PF13176.2|1.2,TPR_7|PF13176.2|4.6e+02,TPR_7|PF13176.2|7.6,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|6.9e+02 S_Transcript_208808:207-1856(+)
MFIRQATASLLKRLRSSSKYGYSFFQRATTHTPSCNRIYSSHCSLEHFQGQPRSFTWILLYGQAALIVGGGYAPVIAEGMSSVNSENDASGSSSIGLQQVEDGSIISNEHTIKWRIYTANGKDYLMQGKSKEAERFFISALEEAKKGFGERDPHVASACNNLAELYRVRKAYDKSEPLYLEAINILKESFGPDDVRVGAAFHNLGQFYIVQRKLEEAQGCYELALKIKGRVLGHGHADYADTMFHLGMVSYLQGKMEDAEFLIQDSIRILEEGGQGETYSCTRKLRYLAQIYSKSTNRLQMAENVQRKILHILELTKGWNSMDTVIAAESLSRILQSMGKLREAQEILERCLDARRLLLPEDHIQIGANMLALANVELLSSKQTRELATSEATSKLDRAKELLKSSIRIARGVVEGAKQKKNVRAYERLIESNEQTALLILLQSLKALALVEMAVQEVQDTKEALPALEAESVLRKCTYVFKQYGVKTSASASIEVKREYLSCLKYLVNLITDSMSKNAESPQRVEIKELNDEIKLVEAEVSSHQTRKI*

Click here to download the sequence:
Link to NCBI Protein BLAST