Transcript Information: S_Transcript_209127.p1


Annotated TAIR IDAT3G19380.1
Annotated Gene Nameplant U-box 25
Annotated Gene Symbol(s)PUB25
Annotation TypeHomolog
Chromosome Positionchr3:6714602-6715867 | Reverse length=421
E-Value6E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8080864612661
Replicate 22.6983267804155
Replicate 31.8133145789631
Condition 2: 8 Hour
Replicate 12.2501610886183
Replicate 21.663135030771
Replicate 31.8913341999624
Condition 3: 24 Hour
Replicate 10.99533042283283
Replicate 21.1413430290247
Replicate 31.4516284549707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209127.p1 GENE.S_Transcript_209127~~S_Transcript_209127.p1 ORF type:complete len:417 (+),score=78.26,U-box|PF04564.11|5.5e-19 S_Transcript_209127:352-1602(+)
ATGAGGGCAATGGAGATGTCAATTATTCCTCACTTGTTCTTATGCCCAATTAGCCTAGAATTGTTCACTGATCCAGTGACTTTATGCACTGGACAAACCTATGACAGGCCCTGCATTGAGAAGTGGCTTTCTGCTGGTAACTTAACTTGTCCTGTTACAATGCAGAAGCTTCATGATATGACTTTGGTTCCTAATCACAATCTTAGGCATTTGATTGATCAATGGCTTCAAATGGTTCATCTTCATCACCAGTTTGATGATCCTGAGGTGGGTTCAGCTTCTAATGTTTCTTTAACTTGTTTGAAACACACACTTGAATCACAGGACTCAAGTTCTGATCAGAAGATACTTGCACTAGAGGAAATCAGAAGCTTGTCAGAGGAGTTGCCCAACAAAAGTGAAGGTTTAGTCCAATTGGGTTTCTTTCCTTTGATTTTGGGTTTGGTTTTTGGACCACAATCAAACCAACAAATGATGGGTTTGGTAGAAAAAGCACTTGATTGTAGCCTCAAGTTGATGCCATTTTGTTACTTGGGGTATCTAAATATGCTCATGGAAGAGTCCAAGTTTGAAAAATTCAAAGTTTTATTCCAAGAGGGAACTTCCCTAGTCAAAATAAGCTTGTGCAACTTTATAGAAGCCATTTTCACTTCATCATCTTTGGAAACAAAAGATTTAGCTACTGAGATTGGAAATGACTCCAAATTACTACAAGAGTTAATCCATTCTCTCCATGATTACCAACAAAATCCTGAGGTTTCAGAAGCCGGGATTAAGGCAATCTTAAGCTTGTTATTATCGTCAAGCAACACAAGTACACAAGCAATAACATACCGCGAAAATTTGGTTAAACAAGGGTTAGTACATTCATTAGTGGCATACATTATGGAAGTGGAGAAGCAAGAAAAGAATTTAGCACCAAAAGCAACAAGGGCACTTGAGTTACTCTTAGAGTCAAAAAGTGGTAAAGAGGCCTTTTCAATGAATGAGGTCCCAAATGGTGTAAAAGCACTTGTGAAGATGGTGTTTAGAGTGTCAGGGGATGATGAAGGAAGTGAAAGTGCTGTAAATTCACTCATGATTTTGTGTTGTGAATCATTGGAGATAAGAGAAGCAGCAATTTGTGGAGGAATTTTGACACAATTGTTGTTGTTGTTACAAAGTCAGTGTAGTGGGAGGGCCAAGACAAAGGCCAGGATGTTGTTAAAGTTGCTTAGAACCATGTGGTCTAAAGATCTTAAGCATGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209127.p1 GENE.S_Transcript_209127~~S_Transcript_209127.p1 ORF type:complete len:417 (+),score=78.26,U-box|PF04564.11|5.5e-19 S_Transcript_209127:352-1602(+)
MRAMEMSIIPHLFLCPISLELFTDPVTLCTGQTYDRPCIEKWLSAGNLTCPVTMQKLHDMTLVPNHNLRHLIDQWLQMVHLHHQFDDPEVGSASNVSLTCLKHTLESQDSSSDQKILALEEIRSLSEELPNKSEGLVQLGFFPLILGLVFGPQSNQQMMGLVEKALDCSLKLMPFCYLGYLNMLMEESKFEKFKVLFQEGTSLVKISLCNFIEAIFTSSSLETKDLATEIGNDSKLLQELIHSLHDYQQNPEVSEAGIKAILSLLLSSSNTSTQAITYRENLVKQGLVHSLVAYIMEVEKQEKNLAPKATRALELLLESKSGKEAFSMNEVPNGVKALVKMVFRVSGDDEGSESAVNSLMILCCESLEIREAAICGGILTQLLLLLQSQCSGRAKTKARMLLKLLRTMWSKDLKHV*

Click here to download the sequence:
Link to NCBI Protein BLAST