Transcript Information: S_Transcript_20948.p1


Annotated TAIR IDAT5G66440.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26530274-26531032 | Reverse length=252
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.906539384047
Replicate 22.4848875610853
Replicate 32.2030572113516
Condition 2: 8 Hour
Replicate 17.7877705253694
Replicate 27.8645065184022
Replicate 36.8385313135435
Condition 3: 24 Hour
Replicate 12.5349011559051
Replicate 23.2487374955856
Replicate 32.4963798216668


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20948.p1 GENE.S_Transcript_20948~~S_Transcript_20948.p1 ORF type:5prime_partial len:293 (+),score=39.95 S_Transcript_20948:1-879(+)
CATTTCTCCCTCTCCCTCTCTCTCCTTTCTCTCTCTTCCGTTTCCCTCCTAAACTTACAGAAAACCGTTCCACAGTTACTTGACTCAAAGTCTTCAACCAACGCTTTTTTTTTTCTGAATTTGAATCTTAAATTTGAAATGGAGACATACGAAATCGACACGATCAAAATCGAGAAACTGAAAGCCATGAGACGGTACAACACCTTCAAGAAGATCAATACCATTGTCAAAACTCTCGAAATCCTCATCGCTATTATGTTCATCTCTTTCTCTATGTCCTGGTCCTCTTCTTACATTCCGATCGCCGTCAATTTTTCCACTACATTTCTCCGGCGAATTTCCTCTCTCCTCTTTAGTCCTCACTTCGTCTTCGTCATCGGAAACGCCATCGTCATCACTCTCTTCGCCAAATCCTCCTCATCGGATAACTCCGCCAATTCCTCGCCGGAAGATTTCTCCGGTGAATCTCCGGTCCCGGTGGAGGAGGAGAGAGAAACGGATAAGGCGACAGTTCGGCTGGAGGAGGAGACAGAAACGGATAAGGCGACAGTTCCGCTGGAGGAGGCGAGGGAAACTGAAAAGGCGATAGTGCCGATGGTGGAGCAGAGTGAAAACAAAAGGGAAAAGGAGCAGGAGAAGAGTTACCGGAGAACGAAGTCGACGGTGGAGGTGGTGGCGGTAAAGGATGAGGAGAAGAAGGAGCTCCGGCGATCGGTGACGGAGCCTCGACGGAAAGCGAAGAAAATAGAATCGTCGATGAGGATGTTTGAGGAAGATGATTTGAGTGGAGAAGAGTTTCGGAGAAAAGTGGAGGCGTTTATCGAGAAACAACAGAGGTTCTTAAGAGAAGAGATTAAGGCTGTTGTTTTGAGTAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20948.p1 GENE.S_Transcript_20948~~S_Transcript_20948.p1 ORF type:5prime_partial len:293 (+),score=39.95 S_Transcript_20948:1-879(+)
HFSLSLSLLSLSSVSLLNLQKTVPQLLDSKSSTNAFFFLNLNLKFEMETYEIDTIKIEKLKAMRRYNTFKKINTIVKTLEILIAIMFISFSMSWSSSYIPIAVNFSTTFLRRISSLLFSPHFVFVIGNAIVITLFAKSSSSDNSANSSPEDFSGESPVPVEEERETDKATVRLEEETETDKATVPLEEARETEKAIVPMVEQSENKREKEQEKSYRRTKSTVEVVAVKDEEKKELRRSVTEPRRKAKKIESSMRMFEEDDLSGEEFRRKVEAFIEKQQRFLREEIKAVVLSK*

Click here to download the sequence:
Link to NCBI Protein BLAST