Transcript Information: S_Transcript_20951.p1


Annotated TAIR IDAT5G16270.1
Annotated Gene Namesister chromatid cohesion 1 protein 4
Annotated Gene Symbol(s)ATRAD21.3, SYN4
Annotation TypeOrtholog
Chromosome Positionchr5:5316783-5322330 | Forward length=1031
E-Value2.3E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6368421738903
Replicate 211.53402427707
Replicate 311.351644112208
Condition 2: 8 Hour
Replicate 111.080338693954
Replicate 210.515305355843
Replicate 311.75694232409
Condition 3: 24 Hour
Replicate 114.336250476241
Replicate 211.540246182361
Replicate 311.189636007066


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20951.p1 GENE.S_Transcript_20951~~S_Transcript_20951.p1 ORF type:complete len:1251 (+),score=351.56,Rad21_Rec8_N|PF04825.9|3.9e-37,Rad21_Rec8|PF04824.12|3.8e+03,Rad21_Rec8|PF04824.12|4e+03,Rad21_Rec8|PF04824.12|1.5e-15 S_Transcript_20951:723-4475(+)
ATGTTTTACTCACAGTTTATATTGGCCAAGAAAGGGCCTTTAGGGACTATATGGATAGCTGCACATTTGGAACGGAAGCTTAGGAAGAATCAAGTTGCTGATACTGATATTGGTGTCTCTGTCGATTCAATATTGTTCCCAGAGGTACCAATTGCACTCCGTTTGTCTAGCCATTTGCTGCTTGGTGTTGTTAGGATATATTCAAAAAAGGTGAATTACCTCTTTGACGATTGCAGTGAGGCTTTGCTTAAAGTCAAGCAAGCGTTTCGCTCCACCGCAGTTGATTTGCCTCCTGAACAGTCTAAAGCACCATACCATTCAATTACTTTACCAGAGACTTTTGATCTGGATGACTTTGAGCTGCCAGACAATGAGATATTTCATGGGAACTTTGTTGACCATCATGTTAGTACAAGAGAGCAAATTACCCTCCAGGATACTATGGATGGTGTGGCATTCCCAACATCGCAATTTGGGCCTGATGAGCGATTTGGTGATGGTGATGCATCTCAGATTGGTTTGGACCTTGATGAGGATTTATTTTTGGACAAGGGTGAAGCTGCAGGAACAAGTGGAGTTATAATGGACATGGATGTTGAACCTCAGACATCTGTAAAAGCATCTTCACCTTCCAAAGGTGATGAACATACTGAAGGCATTCCAGAGCCTTCATCAGCTTCTCCTGCTAATTACTTCAGTATCCAGGCTCCATCCACCCCGGGGCTAATGGAAGAGCCAAACTTGCCTAGCGCTGAAGAAGCTCTAGTCAGTGATGACTATATGGATGAGGACCGTAACCCACCAGAGGTAGCACCAAAGGAAGTGTCTGGACCTGAGTCAAGTCAGCCAGAACCTTCAAATTTTAGTAATGTTAATTTTCATGCCAATGAGAATTGCCAGGACCAGAGTGAGATGGAGAATGAAAAAGGCAGGTCATTAGGTGTCGAATGCTCAAATGAGACCGTGGAACCTATCTCAACTGGTACTGTACTGCCGCTTACTTCAAGTGAGCATGTTGAGGCAACCAATGGTCTGGATAATATAGGTAATACTGTTGATGGTAATTCTCTCGAGGATGAAAGAAGTATGCAACCTGATATTCAATCTACAGGACTCTCTGAAGATGATGAAATAAGCATCAACCCAGGATCCATGCCTTCGCCTCAGATTACATCTGTTTCTGAGGGCCATAATGCATTTTCAGGCAATGATAAAGCTGACTTAAATGGCGTATATCCTATCATGCTTAATATGAAATCTGAAAATGATAAGTCATCAGTTGGTTCTGGAGTCCCTACTGGAGAAACTGAAATGTTTACTGTCAGTAGTGTCTCTGAACCTCTGAATGCTGGTCAGCCTTGTCTAAACCCTGAAATTCACGTGGCCTCTGATCCCAATACAGACAACAGGCTCTCAGATCTTTCCATACCAGTCCTTCAGGCTTGCAATTCGTATGTCCAGCATGGGTGTAATGGAGTTGATAGTTTGCTTGACGCCTCCAACCAACCTGGCGGAAATGATGGTCTGTCTTCATTGGGGACATCTGGAAAGGAAGACACAACAAACATTTCTGGTATTTCTGTGGAAGTTCAAGATGCAATGAAAACAACTATGAACGCAGACCAGATGACTCATGAAGTTACTGATGCAGATAGTAGTTACTTGGATGGGAAACCAGGCAATGTGACATCAGAAGAAAATAATTTAAAAAAAGAAAATAACTCCAGAACATCTGATTTTTCTGCCCCTGAAAAGTTGCTTTCTATGCCTCATCTTGTTGGTGGTCAATCTGGTGAACTTTTTGTTGAGTGTACTCCTGCTAAAGAAGATTTAGCAGAGGGGGCTGGTGATGCTACTATGGAAAATATTGTATCTGGGAAGAAAAGAAGTTACACGGAAAGTACTTTGACCATTCAAAGTCTAAATTCAGCTGAATCTTCTGGTGCTCAATCTAAAAGATCTGTAGAATTTGTTCCTGATGATGATGATCTGCTTTCTTCCATTTTAGTTGGTAAAAGGTCAACGACCTTGAAAATGAAGTCCACACCACCTGTTATCGAGACAGTACGTGCAAAGCGTCAGCGTGTTGCTGTCCGCGCCAGTGCTCACAAGAGGAAGGTGCTCATGGACGATGCTATGGTCTTGCATGGCGACATGATACGCCAACAGTTAACGGATACTGAAGATATACGTCGTGTGCGAAAGAAAGCTCCCTGTACACATCTTGAAATTTGGATGCTTCAGAAACAATTCTTGGAGGATGAGATTTTCAGCGAACCTGTATTTACAGGGATGTCAGGTTCGTTGATCTCTTTGGATACAGAGGCATTTGATCTGAGAAGAATTGCAATCGTTCAGGAGGATGTAAGCAAGGGAGCAAACGAGGTGGACACCTCTAAAAAGCCAACACTAGGTGAAGAAGCCGAGCATGTGGGCAATTGTATGTCTTCCACTGCCAGACATGATGGTGAGCAAGAACATGGAGGAATCTTGGAGAACCCGAGTCATCAAGAATCTATCTTATGTGCTGATGGTGATATCCTACAGAAAGAGACAAAGGCAGCAGATGATGAAGTCATCAAAGAGGTGTCAGGCGAAAAGGTTGAAATAAAAATTGGTGGTGAAAGAGTTTCACTTGGTGAAAATATGGGCTCTGAGCATGCCGTTGCATCGAGTCATACTTCTGAAGCCAACTGTAACTCATCAGATGGCGCAATAGCCAATTCATCTCATCTAAACAAAAATGGTGATGTAGTTGTGCCTGGCCCTGATGATGCATCATGCTGTTTAATGGATCCAAGGCATGATTTGCAATCTACATGGGGAGATGCTTCTGCCATGGAGGATGGTGACCGACCAAGGATTAGGGATCAGGAAGGAGCAAATTTGCTTGAGAAATTTGATTCAGATGAAAGATTAGATGCAAAATTTTCAGAGGAAGCCGAAAGCATTGACAATGGTATACCACGGGCAGATGTCCAGGACCATTTCTCAGTGCCTCTTGAAGGTGGGGCTTGCCCAACATCCGATCAGGTCATCGATGAATGTCAACTGACTGAAACTGTGCCTTTTCAAGATGGGGTTTGCACAACCTCAGATCAGGTTATGGATGAATGTCAAGCGACTGAATCTTGTCCTGCAACTGTTCATGATGAACTTCTTGCTTCTGAACAAAGACATGATGGTAGCGGCCTAACTTCAAACAATCTTGGTGATGTAGATTACAAGTTAGATTCTTCATGTGCAGTAGAAGCTGATTTAAGCTCCCAAAATACCTTGTTGAAAGAAAGAGAGAATCCGGAGTACTGGGAAGCTGATGCTAAGATTGACAAGGATTCAAGAAACATACATACGGACTACAATTATGCTGGAGATCATGCTGAATTTGGGATGGATACCATTGAGCATGACACAGATTTTCTCAATGTTGATGATGATGAGGTTGCTGAAGATTATGAAAGCGATATGCCTAATGCTGAAGAGAAACGGGTTCTAGACAACACTGGTTGGTCTGGTCGTACAAGGGCTGTTGCCAAATATCTTCAAGTCCTATTTGAAAAGGAAGCCAACCATGGAAAACAGGAGGTTTCCCTCGACAGCTTATTAGCTGGAAAAACTTGTAAGGAAGCATCGAGAATGTTCTTTGAGACATTGGTCCTCAAAACTAAGGATTACATCCATGCACAGCAGGAGAACTCTTTTTGTGACATTCGAATAAAGCCTCGAGGAAATCTCTTGAAACCAGATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20951.p1 GENE.S_Transcript_20951~~S_Transcript_20951.p1 ORF type:complete len:1251 (+),score=351.56,Rad21_Rec8_N|PF04825.9|3.9e-37,Rad21_Rec8|PF04824.12|3.8e+03,Rad21_Rec8|PF04824.12|4e+03,Rad21_Rec8|PF04824.12|1.5e-15 S_Transcript_20951:723-4475(+)
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLLLGVVRIYSKKVNYLFDDCSEALLKVKQAFRSTAVDLPPEQSKAPYHSITLPETFDLDDFELPDNEIFHGNFVDHHVSTREQITLQDTMDGVAFPTSQFGPDERFGDGDASQIGLDLDEDLFLDKGEAAGTSGVIMDMDVEPQTSVKASSPSKGDEHTEGIPEPSSASPANYFSIQAPSTPGLMEEPNLPSAEEALVSDDYMDEDRNPPEVAPKEVSGPESSQPEPSNFSNVNFHANENCQDQSEMENEKGRSLGVECSNETVEPISTGTVLPLTSSEHVEATNGLDNIGNTVDGNSLEDERSMQPDIQSTGLSEDDEISINPGSMPSPQITSVSEGHNAFSGNDKADLNGVYPIMLNMKSENDKSSVGSGVPTGETEMFTVSSVSEPLNAGQPCLNPEIHVASDPNTDNRLSDLSIPVLQACNSYVQHGCNGVDSLLDASNQPGGNDGLSSLGTSGKEDTTNISGISVEVQDAMKTTMNADQMTHEVTDADSSYLDGKPGNVTSEENNLKKENNSRTSDFSAPEKLLSMPHLVGGQSGELFVECTPAKEDLAEGAGDATMENIVSGKKRSYTESTLTIQSLNSAESSGAQSKRSVEFVPDDDDLLSSILVGKRSTTLKMKSTPPVIETVRAKRQRVAVRASAHKRKVLMDDAMVLHGDMIRQQLTDTEDIRRVRKKAPCTHLEIWMLQKQFLEDEIFSEPVFTGMSGSLISLDTEAFDLRRIAIVQEDVSKGANEVDTSKKPTLGEEAEHVGNCMSSTARHDGEQEHGGILENPSHQESILCADGDILQKETKAADDEVIKEVSGEKVEIKIGGERVSLGENMGSEHAVASSHTSEANCNSSDGAIANSSHLNKNGDVVVPGPDDASCCLMDPRHDLQSTWGDASAMEDGDRPRIRDQEGANLLEKFDSDERLDAKFSEEAESIDNGIPRADVQDHFSVPLEGGACPTSDQVIDECQLTETVPFQDGVCTTSDQVMDECQATESCPATVHDELLASEQRHDGSGLTSNNLGDVDYKLDSSCAVEADLSSQNTLLKERENPEYWEADAKIDKDSRNIHTDYNYAGDHAEFGMDTIEHDTDFLNVDDDEVAEDYESDMPNAEEKRVLDNTGWSGRTRAVAKYLQVLFEKEANHGKQEVSLDSLLAGKTCKEASRMFFETLVLKTKDYIHAQQENSFCDIRIKPRGNLLKPDF*

Click here to download the sequence:
Link to NCBI Protein BLAST