Transcript Information: S_Transcript_20956.p1


Annotated TAIR IDAT4G00450.1
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)CRP, CCT
Annotation TypeOrtholog
Chromosome Positionchr4:202425-210666 | Forward length=2253
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8060589738665
Replicate 29.1847532906589
Replicate 39.1358599926084
Condition 2: 8 Hour
Replicate 110.053844336921
Replicate 29.8702543534958
Replicate 310.299018608556
Condition 3: 24 Hour
Replicate 110.266775403339
Replicate 29.6893601468425
Replicate 38.7027747166506


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20956.p1 GENE.S_Transcript_20956~~S_Transcript_20956.p1 ORF type:5prime_partial len:2049 (+),score=459.28,Med12|PF09497.6|3.1e-09 S_Transcript_20956:2-6148(+)
GATCATGTTCCTCATGGCTATAGGAAAAAGTCCTTATTCGAGGTTCTCATCAGAAACAATGTTCCCTTGCTGAGAGCCACATGGTTTGTAAAAGTGAACTATCTTAATCAGATTCGCCCAGGATCTTCTGGGACATTGGATAGAAGTTACTTGTCTCGCTCAGAGCTCTGGACAAAGGATGTTACTGATTACTTGCAGTGCCTTCTCGATGAACTTATCTCAAGAAATAACTCACCACCCGTCCCCCAGAACAGGGAGCGGTCTTCTCAAATGCTTTATGCTGGATCTGTACAACCAAAATCTGAGCCAATGTCAGCCCTGACAGATGGCAAGGAGCCATCTTTGCATTATAAGTGGTGGTATGTGGTGCGTCTTTTGAATTGGCACCATGCAGAAGGACTTATTCTTCCATCTCAAGTTATAGACTGGGTTTTTCTACAGTTTCAGGATAAGGATCTTATTCAGGTCATGCAGTTTCTGCTGCCAGTTATATATGGATTGCTGGAAACCATTATTTTATGTCAGACATATGTGCGGAAACTTGTGGACATTACTCTACGCTATCTCAAAGAACCTTTTTCAGGTGTTTCTGATCCAGTAGATAATTCACGAAGGGCATATACTTCCTCTGCTCTTGTTGAGATGCTTCAGTATCTTATGCTGTCTGTGCCTGATACTTTTGTTGCTTTGGATTGCTTTCCATTACCCCCCTGTTTGACGATGAAATCTGGCAATAATGCTCCCAAATTGTCTGTAGATACTGAGTCCCCGAATAATGGTCCTGTTGGGGTTTCATCTATTTCCAGAGATAACAATGTTGATACCAAAAATCCATCCTCATGGTTCAATCGTGTAGTTTCATCTGTTCAGAAACGTGCTGTGTGTCTGGCGAAGGCTGCTAGCCCTGGCTATTCTAGACAGAATGTGGCTAAAACAGTGCAGGCCCTGGATAAAGCTCTTCTGCAAGGAGATGTGATGGAGGCTTACAAGTTTCTTTTTGAAGACCTTTCTGATTCCTGTATTGATGAAAGTTGGATTGCAGAAGTGAGTCCATGCTTAAGATCATCACTGAAGTGGATAGGATTTGTTAGTTCTTCGTTGGTTTACTCCGTGTTTCTTCTTTGCGAATGGTGTACTTGTGATTTCAGGGATTTTCGAACTGCTCCACTTAGTGATGTAAAGTTCACTGGTAGAAAAGACTTCTCCCAACTGTATGTTGCTGTTAGGCTCATGAAGCTTAAGATGAGAGAAATACAAATATCAGTCATGGGAAAAACAAGTTCTGAGAGGACCAACCGGCATCTTTATGACACAAAAATTAATTATAGGAGTGTAGAGAATTCTGATTTATTTGAAAGTCCTGGTCCTTTGCATGATATCATAGTTTGCTGGATGGATCAACATGAAGCACAAAAAGGCGAAGGTTTCAAACGTGTACAGTTTCTCCTTGTGGAGCTTATACGTTCTGGAATTTTTTCGCCACAGGCATATGTAAGACAGCTACTAGTTAGTGGAATTATGGACAAAAATGGGCCTGCCAATGACCTTGACAGATGGAAGAGACACTATAGGATATTGAAACATCTTTCAAGTTCCTGCATGCGTGATGCTTTTGATGAAGCACAGCTTGCTGATATGCCACATTTACTGCATGCAATACATGTGTACTCAAATGAACGACGCCTTCTTCTTCGTGGACTTCTTGGTGATGAGCATAGGAGGTTAAGCAGTGCTAATGCTTCTCAGAAACAAAAAGGACGGCAAGACTTTCATAGAGATCTTTCTGCCTCTTCATTGTATCAATTGAAAATGCTGAAGTCATCATTAAACTTATCTCATACTAAGAACAAGAAGAATGATGCTGATCTTGGAGAACTGAAGAATCTTATTTTAGAGCTGTTGCATCTCCCAAAGCCTCCTGCTGATGCTGTAATTGATGAATCTCAAGTGAGCATGAAAAGACCTGTTGCAAACATCACAGAAGGAACACCTGGCTGTGAAGAATGTCGAAGAGCAAAGAGACAAAAAGTAGGTGAGGACAAATATTCATTTATCCAAGGTCCCTCACCAAATCCATCAGATGATGAAGACACTTGGTGGATGAGGAAGGAGACAAAATCCACAGAGCTGTGTAAGGGAGATCCACCACTTAAACCTAGCAAGCAGGCTCCAAGAGGTAGGCAAAAGACAGTGCGTAAGACGCAAAGTGTTAATCAGCTAGCTGCTGCAAGGATTGAGGGTAGTCAGGGAGCATCGACCAGCCATGTATGTGACAACAGGGTAACATGTCCCCACCATCGCCCAGTTCTTGAGGGAGATACTCCTAAATCTACTCACGGAAACCGAGCAACCAGTAGCCCTGATATCTTTTCAGTTGGAGAGTTGTTGAAACGGCTTAAGTTTGTGGAGAAAAGGAGCATTTCTCTTTGGCTAATGGGTTCTGTCAAAGAAGCTGTTGAAGAGACTGAAAAGACTTCAGCGAAGGCCAGCCAGGTTAATAGGCCTTTGTCTTCTGCCGATGATAAGAGTTCCGTAAGGTGGAAGCTTGCAGAGGATGAGTTGTCCATCATACTCTATTTAATGGACATTTGTACCGATATACCTACTGCAATCAAATTTCTCATTTGGCTGTTGCCTAAGGCTCTTGCTAATCTGAATACCCCTATACATGGTGGAAGGAATATGATGATGTTGCCAAGGAATTTAGACAACCATGCATGTGAAGTAAGGGAGCCATTTCTCCTATCATCTATTCGCAGGTATGAAAATATACTCGTTGCCTCAGATCTTCTTCCTGAAATGCTGTCTGCAGCAATGCATCGCGCTGCTACAGTTGTGACCTCAAATGGGAGGCTTTCAGGTTCACCGACCTTTCTGTATGCTAGGTTTTTGTTGAAGAAATATTCTAGTGTTAGCGGTGTCATAGAATGGGAGAAGAGTTTTAAGGCAACGTGTGACAAAAGACTCCTTTCTGAACTTGAATCTGTGAGATTGCAAAATGGAGAATTTGGTTTTTCTTTTGCTGCTCCAGCAGGAGTAGAGGATCTAGATGGTTTTATCCGCCAAAAGATAAGTGGAAACCGACTGTCTAGAACTGGTATGAGTATGAGAGAAACTGTGCAGAGATATGTTGATGATGCATTGCATCATCTTTTTGGTAAAGAGAGAAAGCTTTTTGGGGCTAGTGCTCAGAAGAATGCTGGCATAGAGAAATGGGATGATGGGTATCAAATAGCTCAACAAATTGTTGTGGGGCTCATGGATTGCATGAGGCAGACTGGTGGTGCTGCTCAAGAAGGGGACCCTTCTTTGGTGTCATCTGCTGTTTCTGCCATTGTAGGCAATGTAGGACCAGCTATTGCGAAAATGCCTGATTTTACTGCATCTAGTAATCATTCAAACTTTCCAGCCCCCACAGGCTCACTGGGTTTTGCTCGTCGAGTTTTGCGGATACATATAAATTGTTTGTGCCTTCTCAAGGAAGCACTAGGCGAGAGGCATAGCCGCACATTTGAGATAGCTCTTGCTACAGAAGCATCTTCCGCTCTCGCTGGAGTTCTTTTGCCTGGAAAGGGTGCTCGAGGTCACTTTCAGTTGTCACCTGAGCCTCAGGAGTCTAATGTTAACATGTCAAATGACATACCTAATAACTCTGCAAAGGTTGCTGTTGGAAGGGCTACAAAGATTGCTGCAGCTGTTTCGGCTCTTATCATTGGAGCAATCATTCATGGGGTTGCTAGCTTGGAAAGAATGGTAACAGTCTTTAGGCTCCGAGAAGGTTTAGATTTGATTCAGTTTGTGAAGACTACAAGATCTCACTCAAATGGGAGTGCTAGAGCTCTCAAGTTAGAAAATGCACTTGAAGTATATATTCATTGGTTTAGGCTACTTGTTGGCAACTGTAGAACGGTTTCTGATGGTGTGATCGTAGAGCTTCTTGGTGAACCATCTGTGGTTGCTCTTTCAAGGATGCAAAGAACACTTCCCATCAACTTGGTCCTACCCCCTGCTTATTCCTTATTTGCTTTCATGATTTGGAGGCCATTCATTTTCAACATCACCATGGGAAATCGTGAAGAAATCCCTCAGTTGTTCCATTCACTGACCCTGGCTATTGGCGATGCTATAAAACATGCACCTTTCCGGGATATCTGTTTGAGGGATACTCATGGTTTCTTTGATCTTGTGACTTCTGATGCCACAGATTCTGAGTTTGCATCCATTTTAGAGTTGAATGGCTCAGATAGACACTTAAAAGCTAGGGCTTTCGTTCCCTTGCGTGCTAGGCTTTTTCTCAATGCGTTAATTGACTGTAAATTGCCACCCGTGGCTTTACACGATGATGGCAGTCGATCATCTGGGACTAATAATGATGCAAAGTTTCAGCGTGCAGAAAGTGATACAAAGATTTCAGACAAGCTTGTGCGTGCTTTAGATGTCTTGCAGCCTGCTAAGTTTCATTGGCAGTGGGTTGAGCTCAGGCTTTTCCTAAGTGAACAAATTCTTGTTGAAAAGCTTGATTCCAATGATATACCATCCATAGCTGAGGCTATGCGCTCTCTTTCATCTAATCCTGAGAAAGGTGGTTCTAAAGAGAATGAGACCAACTTTATTCCAATATTCCTTACAAGGTTATTAGTGAGGCCAGATGCTGCTCCACTTCTTTCAGAATTAGTACATCTTTTTGGAAGGTCATTGGAGGAATCGATGTTGTTACATGTTAAATGGTTTCTAGAAGGACCTGATGTTCTTTTTGGAAGGAAATCTATAAGGCAGCGCCTTGTGAATCTTGCAGATAGCAAAGGGTTGTCTACCAAGGCCCAATTATGGAAGCCATGGGGCTGGTCTCATTCTAGTTCTGGTCCCATGGGAAACAGGGGCGACAAAAGGAGAACTGAAGCTTTGTCCCTTGAAGAAGGAGAGGTGGTCGAAGAAGATTGCAAAAGACATGTCAGAGGTGCCTGTAAGGTATCGGATCGTGATGGCCACATCACCAATCACCAGTTTGTAACAGAGAGAGCCCTTGTTGAATTAGTTCTTCCTTGCATCGATCGAAGCTCAGATGATTCTCGCAACAGGTTTGCTAGTGACCTGATTAAGCAGATGAATAATATTGAGCAACAAATAAGTGGGGTCACTTGTGGGTCAAATAAGCAGACAGGATCTTCTGGAAGTGAAGTATCTACAAATAAGACAAGCAACCGTAAGAGCATGAAAGGTGGAAGTCCTGGTTTGGCTAGGCGAGTAGCTGTCCCTGCTGTGGATTCAACTCCATCATCTCCTGCAGCTTTGCGGGCTTCCATGTCCTTGCGGCTGCAGCTCCTTTTGAGACTGCTTCCTACTATTTGTGCAGAGGGGGATCCATCAGGTCGCAGTTCAAGATTCATGCTTGCCTCAATTGTAATGCGTCTCCTTGGAAGTAGAGTTGTGTATGAAGATATGATCTTAACTCTCAACTCTGAGCGAGGATCTCTATCAAAGGAGGCAGAGTTACAGATGGAAACTTGTGCTGCTGTGTCTTTGGATTTATCCGGAAGGCATGTATTTGATTGGTTGTTGCTAGTGCTTCATGCTTTACTGAGCAGTTCCCCTCCAACCTGGCTGAGATTAAGAACTTCCTCCAAGACTACCAATGCGCCAACTAGAGATTTCTCCGGTTTTGATCGTGAGATATTGGAGAGTTTACAGAATGAGTTGGATCGCATGCAGTTGCCAGATGTAATAAGGTGGCGGATCCAAGCTGCCATGCCAATTCTTGTACCAAACCCTCGAACCAGTATTTCTTGTCAGCCTCCTTCTGTTTCATCAGCTGCTCTTGCGTCACTTCAACCTAGCATCATGTTCTCAGCATCTAGTCAAGTCAGCCCTTTGCCAAAGAATTCATTGCCTTCAGTACGGTCTGCCACGGCTACCGCTATGCTTGGAAAATCGAAGTTGGCAGCCTCGCAACCTGATCATCATGATTTGGAGGTTGACCCGTGGTTGATTTTAGAAGATGGGGCAGGGTCCGGCCCATCTTCAAGTAACACTGCACTGATGGGTGGTGGCGACCATGCTAACCTTAGAGCATGTAGTTGGCTTAAAGGATCTGTCAGAGTGAGACGGACTGATCTCACATACATTGGTGCTGTGGATGATGATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20956.p1 GENE.S_Transcript_20956~~S_Transcript_20956.p1 ORF type:5prime_partial len:2049 (+),score=459.28,Med12|PF09497.6|3.1e-09 S_Transcript_20956:2-6148(+)
DHVPHGYRKKSLFEVLIRNNVPLLRATWFVKVNYLNQIRPGSSGTLDRSYLSRSELWTKDVTDYLQCLLDELISRNNSPPVPQNRERSSQMLYAGSVQPKSEPMSALTDGKEPSLHYKWWYVVRLLNWHHAEGLILPSQVIDWVFLQFQDKDLIQVMQFLLPVIYGLLETIILCQTYVRKLVDITLRYLKEPFSGVSDPVDNSRRAYTSSALVEMLQYLMLSVPDTFVALDCFPLPPCLTMKSGNNAPKLSVDTESPNNGPVGVSSISRDNNVDTKNPSSWFNRVVSSVQKRAVCLAKAASPGYSRQNVAKTVQALDKALLQGDVMEAYKFLFEDLSDSCIDESWIAEVSPCLRSSLKWIGFVSSSLVYSVFLLCEWCTCDFRDFRTAPLSDVKFTGRKDFSQLYVAVRLMKLKMREIQISVMGKTSSERTNRHLYDTKINYRSVENSDLFESPGPLHDIIVCWMDQHEAQKGEGFKRVQFLLVELIRSGIFSPQAYVRQLLVSGIMDKNGPANDLDRWKRHYRILKHLSSSCMRDAFDEAQLADMPHLLHAIHVYSNERRLLLRGLLGDEHRRLSSANASQKQKGRQDFHRDLSASSLYQLKMLKSSLNLSHTKNKKNDADLGELKNLILELLHLPKPPADAVIDESQVSMKRPVANITEGTPGCEECRRAKRQKVGEDKYSFIQGPSPNPSDDEDTWWMRKETKSTELCKGDPPLKPSKQAPRGRQKTVRKTQSVNQLAAARIEGSQGASTSHVCDNRVTCPHHRPVLEGDTPKSTHGNRATSSPDIFSVGELLKRLKFVEKRSISLWLMGSVKEAVEETEKTSAKASQVNRPLSSADDKSSVRWKLAEDELSIILYLMDICTDIPTAIKFLIWLLPKALANLNTPIHGGRNMMMLPRNLDNHACEVREPFLLSSIRRYENILVASDLLPEMLSAAMHRAATVVTSNGRLSGSPTFLYARFLLKKYSSVSGVIEWEKSFKATCDKRLLSELESVRLQNGEFGFSFAAPAGVEDLDGFIRQKISGNRLSRTGMSMRETVQRYVDDALHHLFGKERKLFGASAQKNAGIEKWDDGYQIAQQIVVGLMDCMRQTGGAAQEGDPSLVSSAVSAIVGNVGPAIAKMPDFTASSNHSNFPAPTGSLGFARRVLRIHINCLCLLKEALGERHSRTFEIALATEASSALAGVLLPGKGARGHFQLSPEPQESNVNMSNDIPNNSAKVAVGRATKIAAAVSALIIGAIIHGVASLERMVTVFRLREGLDLIQFVKTTRSHSNGSARALKLENALEVYIHWFRLLVGNCRTVSDGVIVELLGEPSVVALSRMQRTLPINLVLPPAYSLFAFMIWRPFIFNITMGNREEIPQLFHSLTLAIGDAIKHAPFRDICLRDTHGFFDLVTSDATDSEFASILELNGSDRHLKARAFVPLRARLFLNALIDCKLPPVALHDDGSRSSGTNNDAKFQRAESDTKISDKLVRALDVLQPAKFHWQWVELRLFLSEQILVEKLDSNDIPSIAEAMRSLSSNPEKGGSKENETNFIPIFLTRLLVRPDAAPLLSELVHLFGRSLEESMLLHVKWFLEGPDVLFGRKSIRQRLVNLADSKGLSTKAQLWKPWGWSHSSSGPMGNRGDKRRTEALSLEEGEVVEEDCKRHVRGACKVSDRDGHITNHQFVTERALVELVLPCIDRSSDDSRNRFASDLIKQMNNIEQQISGVTCGSNKQTGSSGSEVSTNKTSNRKSMKGGSPGLARRVAVPAVDSTPSSPAALRASMSLRLQLLLRLLPTICAEGDPSGRSSRFMLASIVMRLLGSRVVYEDMILTLNSERGSLSKEAELQMETCAAVSLDLSGRHVFDWLLLVLHALLSSSPPTWLRLRTSSKTTNAPTRDFSGFDREILESLQNELDRMQLPDVIRWRIQAAMPILVPNPRTSISCQPPSVSSAALASLQPSIMFSASSQVSPLPKNSLPSVRSATATAMLGKSKLAASQPDHHDLEVDPWLILEDGAGSGPSSSNTALMGGGDHANLRACSWLKGSVRVRRTDLTYIGAVDDDS*

Click here to download the sequence:
Link to NCBI Protein BLAST