Transcript Information: S_Transcript_209593.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeOrtholog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value1.6E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.359931916483
Replicate 211.031394778757
Replicate 36.4549576292602
Condition 2: 8 Hour
Replicate 16.2199055091638
Replicate 23.4023853139584
Replicate 35.9506741230573
Condition 3: 24 Hour
Replicate 14.3689766981188
Replicate 27.3185224881955
Replicate 37.0936999889389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209593.p1 GENE.S_Transcript_209593~~S_Transcript_209593.p1 ORF type:complete len:480 (+),score=39.10,MatE|PF01554.14|1.5e-31,MatE|PF01554.14|1.4e+03,MatE|PF01554.14|1e-25 S_Transcript_209593:43-1482(+)
ATGAGAGGGAATAACGGCAGCAACAATGATGTTAGAGTGCCGTTGTTGGTTGGGGAGAAAACTAAGTGGTTGGAGAAGGTGGTGGATGTGGAGGAAGGCAAGAAGCAGATGCTGTTAGCACTGCCAATGGTGGTCACCAACGTCTGTTATTATCTAATCCCTTTGGCCTCCGTCATGTTCGCCGGCAACCTTGGTGAGCTTCAGCTCGCTGGCTCCACCCTCGCCAACTCTTGGGCAACCGTCTCTGGCTACGCCTTCATGATTGGTATTGGCAGTGCTGTTGAAACTCTCTGTGGGCAAGGATTTGGTGCACAATGTTACAATATGTTGGGAATATATCTTCAAGCATCCTGCATAATTTCATTCCTGTTTTCCGTCCTCATATCCATGCTATGGTGGTACACTGAACCCATCCTAGAGCTACTTCACCAAAGCCCTGATATCTCCAAAGAAGCCAACACCTACATAAGATATTTAATTCCAGGATTATTCGCATTTGGTATCCTACAAAATATATTGATGTTCATGCAAACTCAATCAGTGGTTTTTCCCCTTGTTATTTGCTCCATATTGTCATTGCTCCTTCATATTGGACTTGTTTATGTTTTGGTTCATTTCACAACCCTTGGTTTCACAGGAGCTGCTTTGGCTACTTCTTTCACCTTTTGGTTATCAGTTGTTATGTTAATGGTTTATGTGTGTTACTCCAAAAATTTTGAGCATACATGGACAGGAATATCCAAGGATTCGTTTCGTTATGTTTTTACAACCTTGAAATTGGCCCTACCCTCAGCTGGCACGGTTTGCTTAGAATATTGGGCTTTTGAGATTCTAGTGTTGCTGGCCGGCTTAATGCCAAACTCAAAAACAAGTACATCTCTCATTGCAATGTGTGTAAACACAGAAACAATTGTCTACAACTTCATCTACGGGTTAAGTGCTGCAGCAAGCACAAGGGTATCTAATGAGCTTGGAGCTGGGAGACCAAATCAAGCTAAGCATGCCATGCATGTATCATTGAAGATATCAATAATCATGACTTTTATTCTTGTTCTCGCTTTGGCCTCTGGACATGATTTTTGGGCGAGCTTATTCAGTGACAGTACCAATATAATAGAAGAATTCTCTTCAATGACACCGTTACTTTGTATTTCGATGTTCGTGGACTCGATTCAAGGCATTCTTTCAGGAGTAAGCAGAGGATGTGGTTGGCAACAATTAGTCTTGTTGATAAATATAGGCACATTCTATGGCATCGGTATGCCTATAGCTTCTTTAGTCGCGTTCAAGCTCAAATTACATGCCAAGGGTCTTTGGATTGGCTTAATATGTGGACTTGGCTCCCAAGCTGTTGCGCTTCTTGTACTTGCTTCTCTCAAGAAATGGACTGTCCTTGAGTTTTCTACAAAGCTAACTAATAATAGTCTAACTTCTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209593.p1 GENE.S_Transcript_209593~~S_Transcript_209593.p1 ORF type:complete len:480 (+),score=39.10,MatE|PF01554.14|1.5e-31,MatE|PF01554.14|1.4e+03,MatE|PF01554.14|1e-25 S_Transcript_209593:43-1482(+)
MRGNNGSNNDVRVPLLVGEKTKWLEKVVDVEEGKKQMLLALPMVVTNVCYYLIPLASVMFAGNLGELQLAGSTLANSWATVSGYAFMIGIGSAVETLCGQGFGAQCYNMLGIYLQASCIISFLFSVLISMLWWYTEPILELLHQSPDISKEANTYIRYLIPGLFAFGILQNILMFMQTQSVVFPLVICSILSLLLHIGLVYVLVHFTTLGFTGAALATSFTFWLSVVMLMVYVCYSKNFEHTWTGISKDSFRYVFTTLKLALPSAGTVCLEYWAFEILVLLAGLMPNSKTSTSLIAMCVNTETIVYNFIYGLSAAASTRVSNELGAGRPNQAKHAMHVSLKISIIMTFILVLALASGHDFWASLFSDSTNIIEEFSSMTPLLCISMFVDSIQGILSGVSRGCGWQQLVLLINIGTFYGIGMPIASLVAFKLKLHAKGLWIGLICGLGSQAVALLVLASLKKWTVLEFSTKLTNNSLTSV*

Click here to download the sequence:
Link to NCBI Protein BLAST