Transcript Information: S_Transcript_209636.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value3E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51843508899702
Replicate 21.5042811061942
Replicate 30.92812470550587
Condition 2: 8 Hour
Replicate 10.96933592350605
Replicate 21.8885326773795
Replicate 31.5571641919223
Condition 3: 24 Hour
Replicate 10.81563688357738
Replicate 21.4348841744765
Replicate 31.3921258275551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209636.p1 GENE.S_Transcript_209636~~S_Transcript_209636.p1 ORF type:complete len:616 (+),score=75.59,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.067,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|1.2e+03,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|12,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_4|PF12799.3|5.4,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|35,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|4.8,LRR_4|PF12799.3|2.6,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|4.9e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|18,LRR_1|PF00560.29|9.3e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|3.8e+02 S_Transcript_209636:109-1956(+)
ATGGCTCTTCATGCTATTTGTTTGTCATCCTTGATAATATTACTTTTGCATGTCGACCTTTTCCGAGCAACTAGTGATAAGCAATCTCAGTATTTTAACCTCATGAAAAGCTCCTTCTCAGGTGACGCCTTATCAGACTGGCGAATCAAGGGTGAGGACTCTTACTGTAACTACACTGGGATCATCTGCAATCCTCGAGGCCAAGTCACAAAGATCGACATTTCAGGATGGTCACTTAAAGGCTCGTTTCCACCAGACGTGTGTTCCTACTTACCAAAGTTGCGTGCACTTGATATCAGTAGCAACTTCATTCACGGCAGTTTTCCTGTCAGCATCACCAATTGTTCGCTCTTGGAAGAACTCGACATGAGCAATTTATATCTCAGAGGGAAGCTGCCAGATTTCTCTCCAATGAAATCCCTTAGGGTGCTGCAAGTACCTTCTAATCAATTCACAGGAGAATTTCCTATGTCGATTACCAACCTCACCAATCTCGAAGTGGTAAACTTCAATGAGAACGAGAAGCTGAACTATTGGGAACTCCCCGAGAACATCACACGGTTAACAAGGCTCAAAACATTGATCCTGTCAACCACTTTTCTTCGAGGACGTATTCTTCCATCAATAGGAAATATGACATCCCTCGTTGATCTTGAGCTCAGCGGGAACTACCTTACAGGCCATATTCCGCCAGAGCTAGGAAAATTGAAGAACCTGAAGTCCCTAATGCTTTACTATAATATGTTGATTACTGGTAGTATTCCAGAAGAGCTGGGAAATCTAACAGAGCTTACAGAATTGGACATGTCAGTGAACCTACTGACAGGTAGAATTCCAGAGTCAATTGCCCGTCTTCCCAAACTCCAAGTCTTACAGCTTTTCAACAACAGCCTTAGTGGAGAGATTCCAGCTTCTCTAGGACAATCCAGTACATTGAGCTACTTTTCTGTCTATGAGAACTTTCTGACAGGTGAAGTTCCTGAAAATCTTGGGAATTCATCAATAATGATGGAAGTAGATATGTCAGAGAATTACTTGTCTGGTAAACTACCACCAAATATCTGCAGAGGGGGTAAACTTGAGCTCTTTCTTGCTCTTTCCAATAGGTTTACTGGTGAGATACCTGAAAGCTACACGACGTGCACATCACTGATACGTTTTCGTGTCAGCAAGAATCAATTGGTGGGATTGGTTCCTCAAGGAATTTTCGGTCTCCCTCGAGTGAATGTCATTGATTTGTCTTTCAATCAATTGACCAGTCCAATACCTATAGAAATCAAAAATGCTAAAAACATGTCAGAATTTATGGCAGCACACAACAAACTATCTGGAGTTCTGCCACCAGAGATATCTGAAGCTCGCAAATTAGTGAAAATTGATCTGCGCAACAATCTCTTGTCTGGTCCTATACCTGCTGAACTTGGCAGCCTTAAGCACCTAAACCTTTTGCTATTGGAAAGCAACAATTTCAGTTCTTCCATCCCGCACTCACTGTCCCAACTCAAATCAGTAAAAGATCTTGATCTGTCCAACAATCAGTTGACAGGGAATATCCCTGAGAACCTATCTGCATTAATCCCCAGAGCTATTAACTTATCAAATAATCATCTTTATGGTCCAATTCCCTACCAGTTTATTGAAGGAGGTCTGGAAGAAAGTTTTTTGGGTAATCCAGGGCTATGTGTGACAGGTTATACTGATTCACTGAGTAGAAGATTCCCACCTTGCCCACAGGCTAACAAATGGAAAAGACTTACCTGGATATGGGTAACAGTGGCTTTAGCAATTGTGATGTTAGCTGGAGCTCCGCTGTTCCTGAAACACTGCCTGAGCAAAGAGAAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209636.p1 GENE.S_Transcript_209636~~S_Transcript_209636.p1 ORF type:complete len:616 (+),score=75.59,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.067,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|1.2e+03,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|12,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_4|PF12799.3|5.4,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|35,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|4.8,LRR_4|PF12799.3|2.6,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|4.9e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|18,LRR_1|PF00560.29|9.3e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|3.8e+02 S_Transcript_209636:109-1956(+)
MALHAICLSSLIILLLHVDLFRATSDKQSQYFNLMKSSFSGDALSDWRIKGEDSYCNYTGIICNPRGQVTKIDISGWSLKGSFPPDVCSYLPKLRALDISSNFIHGSFPVSITNCSLLEELDMSNLYLRGKLPDFSPMKSLRVLQVPSNQFTGEFPMSITNLTNLEVVNFNENEKLNYWELPENITRLTRLKTLILSTTFLRGRILPSIGNMTSLVDLELSGNYLTGHIPPELGKLKNLKSLMLYYNMLITGSIPEELGNLTELTELDMSVNLLTGRIPESIARLPKLQVLQLFNNSLSGEIPASLGQSSTLSYFSVYENFLTGEVPENLGNSSIMMEVDMSENYLSGKLPPNICRGGKLELFLALSNRFTGEIPESYTTCTSLIRFRVSKNQLVGLVPQGIFGLPRVNVIDLSFNQLTSPIPIEIKNAKNMSEFMAAHNKLSGVLPPEISEARKLVKIDLRNNLLSGPIPAELGSLKHLNLLLLESNNFSSSIPHSLSQLKSVKDLDLSNNQLTGNIPENLSALIPRAINLSNNHLYGPIPYQFIEGGLEESFLGNPGLCVTGYTDSLSRRFPPCPQANKWKRLTWIWVTVALAIVMLAGAPLFLKHCLSKEKK*

Click here to download the sequence:
Link to NCBI Protein BLAST