Transcript Information: S_Transcript_209778.p1


Annotated TAIR IDAT4G18930.1
Annotated Gene NameRNA ligase/cyclic nucleotide phosphodiesterase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10370797-10371885 | Forward length=181
E-Value1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5381446728853
Replicate 21.1477751792927
Replicate 30.42642164355146
Condition 2: 8 Hour
Replicate 10.73960891273294
Replicate 22.0690727065643
Replicate 31.1089169274268
Condition 3: 24 Hour
Replicate 11.5152520340297
Replicate 22.0960750590841
Replicate 32.6242589554456


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209778.p1 GENE.S_Transcript_209778~~S_Transcript_209778.p1 ORF type:complete len:173 (+),score=33.65,CPDase|PF07823.7|0.0002,CPDase|PF07823.7|0.00031,2_5_RNA_ligase2|PF13563.2|4.8e-07 S_Transcript_209778:61-579(+)
ATGGCAGCTTTCGATTATTCGGTGTGGGCACTTCCACCGGAAGATGTGAGGACGAGGGCAAAGAAACTGATGGAGACCCTTGGATCAGAGTTTGGTGGGCCCGAGTTCGAGCCCCATGTCACGGTTGTGGGGGCCATCAGCTTGACACCGGAAGATGCTCTTCAGAAATTCAGATCAGCGTTTAAGGGATTGAAGAACTATACTGCTCACGGTAGGGGTATTTCCACTACAATCCTCCTCCTTGACCCCACACCTGATGTTATCAAGGTTAGTGATCACTGCTCTGAGCATTTTGGCTACGTTCGTCCCACACCTTACAAGCCACATATGAGCCTTCTCTATGGAGACTTGACGGACGAGGAGAAGAAGAAAGCTCAGGACAGAGCTAATGCTCTCGATGAAGGCTTTGGCACTGTGTCCTTTCCGCTTACTCGCCTGGTACTTTACAAAACTGATACTGAAGACAAGACCCTCAAATCCTGGGAAAAGGTGGCTGAATGTAACCTCGAAGCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209778.p1 GENE.S_Transcript_209778~~S_Transcript_209778.p1 ORF type:complete len:173 (+),score=33.65,CPDase|PF07823.7|0.0002,CPDase|PF07823.7|0.00031,2_5_RNA_ligase2|PF13563.2|4.8e-07 S_Transcript_209778:61-579(+)
MAAFDYSVWALPPEDVRTRAKKLMETLGSEFGGPEFEPHVTVVGAISLTPEDALQKFRSAFKGLKNYTAHGRGISTTILLLDPTPDVIKVSDHCSEHFGYVRPTPYKPHMSLLYGDLTDEEKKKAQDRANALDEGFGTVSFPLTRLVLYKTDTEDKTLKSWEKVAECNLEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST