Transcript Information: S_Transcript_209783.p1


Annotated TAIR IDAT4G18930.1
Annotated Gene NameRNA ligase/cyclic nucleotide phosphodiesterase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10370797-10371885 | Forward length=181
E-Value3.4E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.717851379285
Replicate 232.481329070786
Replicate 327.971483060128
Condition 2: 8 Hour
Replicate 133.528252554159
Replicate 226.597642271675
Replicate 327.829023262059
Condition 3: 24 Hour
Replicate 134.587732193441
Replicate 235.632548200591
Replicate 327.744248845628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209783.p1 GENE.S_Transcript_209783~~S_Transcript_209783.p1 ORF type:complete len:180 (+),score=30.04,CPDase|PF07823.7|6.5e-16,2_5_RNA_ligase2|PF13563.2|4.2e-07 S_Transcript_209783:61-600(+)
ATGGCAGCTTTCGATTATTCGGTGTGGGCACTTCCACCGGAAGATGTGAGGACGAGGGCAAAGAAACTGATGGAGACCCTTGGATCAGAGTTTGGTGGGCCCGAGTTCGAGCCCCATGTCACGGTTGTGGGGGCCATCAGCTTGACACCGGAAGATGCACTTGAGAAATTCAGATCAGCGTGTAAGGGATTGAAGGTCTATACTTCTCACGGTAGGGGTATCTCCACTGGAACATTCTTTTACCAGTGTGTTTTCCTCCTCCTTGACCCCACCCCTCATGTTGTCAAGGTTAGTGATCACTGCTCTGAGCATTTTAACTACGTTCGTCCCACACCTTACATGCCACATATGAGCCTTCTCTATGCAGACTTGACGGACGAGGAGAAGAAGAAAGCTCAGGACAGAGCTAATGCTCTCGATGAAGGCTTTGGCACTGTGTCCTTTCCGCTTACTCGCCTGGTACTTTACAAAACTGATACTGAAGACAAGACCCTCAAATCCTGGGAAAAGGTGGCTGAATGTAACCTCGAAGCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209783.p1 GENE.S_Transcript_209783~~S_Transcript_209783.p1 ORF type:complete len:180 (+),score=30.04,CPDase|PF07823.7|6.5e-16,2_5_RNA_ligase2|PF13563.2|4.2e-07 S_Transcript_209783:61-600(+)
MAAFDYSVWALPPEDVRTRAKKLMETLGSEFGGPEFEPHVTVVGAISLTPEDALEKFRSACKGLKVYTSHGRGISTGTFFYQCVFLLLDPTPHVVKVSDHCSEHFNYVRPTPYMPHMSLLYADLTDEEKKKAQDRANALDEGFGTVSFPLTRLVLYKTDTEDKTLKSWEKVAECNLEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST