Transcript Information: S_Transcript_20981.p1


Annotated TAIR IDAT1G25420.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8916141-8917980 | Forward length=323
E-Value1E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.371834318243
Replicate 212.06454655562
Replicate 310.363591877794
Condition 2: 8 Hour
Replicate 114.238402598448
Replicate 213.855676649982
Replicate 313.008462888841
Condition 3: 24 Hour
Replicate 17.5896120888771
Replicate 29.1066070684417
Replicate 38.7629459413545


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20981.p1 GENE.S_Transcript_20981~~S_Transcript_20981.p1 ORF type:complete len:331 (+),score=68.95,Ist1|PF03398.10|8.3e-65 S_Transcript_20981:193-1185(+)
ATGTCAGTGTTAAATCAGCTCTTCAATCGGGGTGTCCTTGGTGCCAGATGTAAAACATGCTTAAATTTGGCAATCTCCCGTATCAAATTGCTGCAAAATAAGAGAGATGGCCACCTCAAGCAGATGCGGAAGGAGATAGCTCAATTTTTGCAAACTGGCCAAGAAGCCATTGCTAGAATACGGGTGGAGCATGTCATACGAGAACAAAACATCTGGGCTGCATATGAGATCTTGGAGATGTTTTGTGAATTTGTACTTGCACGTATTCCCATTCTTGAAAGTCAGAGGGAATGTCCTCCTGAGTTGCAGGAGGCTATTGCTAGCATAATCTTTGCAGCTCCACGGTGCTCTGATTTGCCAGACCTACTGCAAGTTAAAAACTTATTTACGGCAAAATATGGAAAGGAATTTGTTTCTGCTGTCTCCGAATTGCGGCCTGATACCAGTGTTAACCGTACAATAATTGAGAAGCTTTCGGTTAGCACTCCATCCCCTGCAGTAAAACTCAAGCTGCTTAAAGATATTGCACGAGAGTATAATGTTATCTGGGATTCTTCTGAAACTGAATTAGAATTCAGCAAGAAACATGATGATCTGTTGGACGGTTCAAAGCCTGCTGGCGAAAGAACTGTACCTTCTGTTTCCCCCATCCAGCACAAGGCTCCTGATTCCTCACCTTCCAATGGGACACAATATACCACACCTTCAATTCCAATTGCTGAGCCAAGCACTCGTGGCCCTCAATCGTCTAGCCTACACAGCAACATGGTATCGATGAATTCTAATGGTACAGGAGTAGCAAAGACAAGTAGCATTCAGAAAGGATCTACTCGCAACATTCAAAAAGATACGGGAGCAAAATCACCCGACATTTTGGAGAAAGCTCGAGCGGCCATTGCCTCTGCAGAGCGTGCATCAGCTGCAGCCCGAGCAGCTGCCCAGTTGGTGAGTGCTAATTTTGGGTCTCTGGAGCTTGGAGAAGGGAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20981.p1 GENE.S_Transcript_20981~~S_Transcript_20981.p1 ORF type:complete len:331 (+),score=68.95,Ist1|PF03398.10|8.3e-65 S_Transcript_20981:193-1185(+)
MSVLNQLFNRGVLGARCKTCLNLAISRIKLLQNKRDGHLKQMRKEIAQFLQTGQEAIARIRVEHVIREQNIWAAYEILEMFCEFVLARIPILESQRECPPELQEAIASIIFAAPRCSDLPDLLQVKNLFTAKYGKEFVSAVSELRPDTSVNRTIIEKLSVSTPSPAVKLKLLKDIAREYNVIWDSSETELEFSKKHDDLLDGSKPAGERTVPSVSPIQHKAPDSSPSNGTQYTTPSIPIAEPSTRGPQSSSLHSNMVSMNSNGTGVAKTSSIQKGSTRNIQKDTGAKSPDILEKARAAIASAERASAAARAAAQLVSANFGSLELGEGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST