Transcript Information: S_Transcript_20984.p1


Annotated TAIR IDAT1G25420.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8916141-8917980 | Forward length=323
E-Value3E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.864290627278
Replicate 28.9317637483595
Replicate 36.6304700723519
Condition 2: 8 Hour
Replicate 111.145898866659
Replicate 210.205888654377
Replicate 312.428877908645
Condition 3: 24 Hour
Replicate 19.5035142678114
Replicate 210.13366801601
Replicate 310.286936539851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20984.p1 GENE.S_Transcript_20984~~S_Transcript_20984.p1 ORF type:complete len:331 (+),score=67.06,Ist1|PF03398.10|5.8e-65 S_Transcript_20984:193-1185(+)
ATGTCAGTGTTAAATCAGCTCTTCAATCGGGGTGTCCTTGGTGCCAGATGTAAAACATGCTTAAATTTGGCAATCTCCCGTATCAAATTGCTGCAAAATAAGAGAGATGGCCACCTCAAGCAGATGCGGAAGGAGATAGCTCAATTTTTGCAAACTGGCCAAGAAGCCATTGCTAGAATACGGGTGGAGCATGTCATACGAGAACAAAACATCTGGGCTGCATATGAGATCTTGGAGATGTTTTGTGAATTTGTACTTGCACGTATTCCCATTCTTGAAAGTCAGAGGGAATGTCCTCCTGAGTTGCAGGAGGCTATTGCTAGCATAATCTTTGCAGCTCCACGGTGCTCTGATTTGCCAGACCTACTGCAAGTTAAAAACTTATTTACGGCAAAATATGGAAAGGAATTTGTTTCTGCTGTCTCCGAATTGCGGCCTGATACCAGTGTTAACCGTACAATAATTGAGAAGCTTTCGGTTAGCACTCCATCTCCTCCAGTAAAACTCAAGCTACTTAAAGATATTGCACAAGAGTATAATGTTAACTGGGATTCTTCTGAAACCGAATTAGAATTCAGCAAGAAACATGATGATCTGCTGGATGGTTCAAAACCCGCTGGCGAAAAAACTGTACTTTCTGTTTTACCCATCCAGCACAAGGCTCATGATTCCTCACCTTCCGATGGGACACAATCTACCACACCTTCAATTCCGAGTGCTGAGCCAAGCACTCGTGGCCCTCAATCGTCTAGCCTTCACAGCAACATGGTATCGGTGAATTCTAATGGTACAGGAGCATCAAAGACAAGTAGCATTCAGAGAGGATCTACTCGCGACATTCAAAAAGATACAGGAGCACAATCATCCGACATTTTGGAGAAAGCTCGAGCGGCCATTGCCTCTGCAGAGCGTGCATCAGCTGCAGCCCGAGCAGCTGCCCAGTTGGTGAGTGCTAATTTTGGGTCTCTGGAGCTTGGAGAAGGGAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20984.p1 GENE.S_Transcript_20984~~S_Transcript_20984.p1 ORF type:complete len:331 (+),score=67.06,Ist1|PF03398.10|5.8e-65 S_Transcript_20984:193-1185(+)
MSVLNQLFNRGVLGARCKTCLNLAISRIKLLQNKRDGHLKQMRKEIAQFLQTGQEAIARIRVEHVIREQNIWAAYEILEMFCEFVLARIPILESQRECPPELQEAIASIIFAAPRCSDLPDLLQVKNLFTAKYGKEFVSAVSELRPDTSVNRTIIEKLSVSTPSPPVKLKLLKDIAQEYNVNWDSSETELEFSKKHDDLLDGSKPAGEKTVLSVLPIQHKAHDSSPSDGTQSTTPSIPSAEPSTRGPQSSSLHSNMVSVNSNGTGASKTSSIQRGSTRDIQKDTGAQSSDILEKARAAIASAERASAAARAAAQLVSANFGSLELGEGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST