Transcript Information: S_Transcript_209925.p1


Annotated TAIR IDAT4G04370.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2134060-2136249 | Reverse length=729
E-Value9.2E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28425101452796
Replicate 20.38293226201294
Replicate 30.24623145638986
Condition 2: 8 Hour
Replicate 11.5374780735984
Replicate 21.8518753213125
Replicate 31.9921352901852
Condition 3: 24 Hour
Replicate 10.46664637630108
Replicate 20.48414016718499
Replicate 30.53878866552985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209925.p1 GENE.S_Transcript_209925~~S_Transcript_209925.p1 ORF type:complete len:749 (+),score=132.43,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|9.6,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|78,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|2.9e-10,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|0.67,PPR|PF01535.16|4.8,PPR|PF01535.16|8.9e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|0.005,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|0.026,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.056,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|0.19,PPR|PF01535.16|6.6e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|7.7e+03,PPR_3|PF13812.2|0.5,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|73,PPR_3|PF13812.2|1.8,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00096,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|79,PPR_1|PF12854.3|11,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.006 S_Transcript_209925:85-2331(+)
ATGAGAAAACTCAAATCCTACTTGAGGCCACCACCATTACTATCCACCAAGTCATTCAATTCCGCCATTAACCGCCTTTCTTCAGAGGGTTCTCACCATGAGGTTCTCTTCACCTTCTCTTCTATGCTCAACTCTCATATTCCACCTGATGCTCACACTTACCCTAGTCTTTTCAAAGCATGCACTTACTTAAACAGGTTTTCACTTGGTATTTCATTACATCAACGTGTAATCGTTGAAGGGTTTTCTTCAGATTCCTTCATTTCGTCTTCCCTCATCAATTTCTATGCCAAGTTTTGTCAGGAGAATAATGCACAGAAGGTGTTTGACTTAATGCCTGAGAGAAATGTAGTTCCTTGGACTGCTATGATTGGGTGCTATTCTAGTTGTGGGGATCTTGGTAGAGCGTTTTGGATGTATAATATGATGAGGTATGAGGGAGTTTCACCTAGCTCTGTTACTGTTTTGAATGTGCTATCTGGGGTCTGTGAGGTTGTCAGGTTGGAATGTTTACAGGCGAGTACGATTCGTTCTGGTTTGGATTCTGATAATCATTTGGTTAATTGTATGTTGAATTTGTATGGAAAATGTGGGAGAGTTGAGGCTGCTAGGGACTTGTTTGAAGCATTGGGTGATAGGGATATTGTTTCATGGAATTCATTGGTGTCTGGTTATGCTCAAACTGGGGATATTGAGGAAGTTTTGTGCCTTTTGAAGAGAATGAGGATTGAGGGTGTTAGTCCTGATAAACAGACTTTTGGGGCTCTTTTGACTTGCTCTAGTGTTTTGCAGACCGATGTGGAGTTGGGAAGGTTGATTCATGCGCAAATTATTACAGGTGGGTTAGAAGTGGATGCCCATGTAGCTACTACTCTCGTGGTCTTGTACTCAAAATATGGAAATGTTGGTTGTGCGTTTAAGATATTTGAAAGGGTCGAAGAGAAGGATGTGATTCTGTGGACTTCTATGATTTCTGCCTGTGTACAGAATGATGGTGGACATAAAGCATTGATGCTCTTTAGGCAGATGATGGAATCTGGGTTCACACCCTCCACTGCAGCTATAGCTACTGCTCTTGCTGCTTGTGCGAAAGTTAGTTCACGCCTGCTTGGGGCTTCAGTACATGGGTATCTAGTACGGCAAAGGATCAAAGTAGATATTCCCATTCAAAATTCACTTATTACTATGTATGCAAAGTGTGGACTCTTACAACAAAGTTCGACTATTTTTGATGATATGAATGAAAGAGATGTAGTTTCATGGAACGCAATTGTTGCAGCATATGCTCAAGATGGGAATTTATCTAAGGCACTTTGCTTTCTTAATGATATGAGATCAATGCGCCAAAGACCGGATTCTATTACTGTTGTTTCCCTGCTCCAAGCTTGTGCTTCCACCGGGGCACTTCAACAAGGAAAGTGGATCCACAACTTCGTTATTAAAAGCTTTTCACAGCCAAGCATCATGGTTGACACTGCTTTGGTTGACATGTATTCAAAATGTGGCGACCTGAAAACTGCTCACAGATGTTTATTAGAGATGCCAGAGCATGATATTGTGTCATGGAGCACAATCATCACATGCTATGGTAGTCATGGCATGGGAGAGATGGCTGTAAAACTTTATTCAGACTTTCTACGCTCTGGGATTCAACCGAACCAAGTCATCTTCCTTTCTGTCCTTTTCGCTTGCAGTCATAATGGGCTGGTTGCCGAAGGTCTCAGCTTATTCAGATCAATGACTGAAGAATTTGGTATTAAACCAGAACTAGAACACCGTGCCTGCATTGTTGATCTGCTCTGTCGAGCAGGAAGGTTAGAAGAGGCATACAACTTCATCAAGACTATGTCCTCTAATCCTAGAGTTGAGATTTTAGGCATACTTCTCGATGCATGTAGGATGAAGGGCAATGCCAAACTTGGAGAAATTGTTGCAAGAGACATCATGCTGCTGAAGCCTGTTTATGCTGAGAATTATGTGCAACTTGCTCATAGTTATGCTTCAATGAATAGATGGGAGGGAGTAGGTGATGCATGGACACAAATGAAGGCTCTCGGATTGAGAAAACTACCTGGTTGGAGCTGTATTCAGCAGCATGGAAAGGTTACAATATTTTTTACAGGTCAGACTACCCATCATCTGTACAAAGAAATGATGTGGGTCTTGGAAATTTTGGGCTATCACATGGATGATCTCAGGTTCAACCACAATAGCAGTGAGCTGCATTGTATCTTGAATGACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209925.p1 GENE.S_Transcript_209925~~S_Transcript_209925.p1 ORF type:complete len:749 (+),score=132.43,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|9.6,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|78,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|2.9e-10,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|0.67,PPR|PF01535.16|4.8,PPR|PF01535.16|8.9e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|0.005,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|0.026,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.056,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|0.19,PPR|PF01535.16|6.6e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|7.7e+03,PPR_3|PF13812.2|0.5,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|73,PPR_3|PF13812.2|1.8,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00096,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|79,PPR_1|PF12854.3|11,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.006 S_Transcript_209925:85-2331(+)
MRKLKSYLRPPPLLSTKSFNSAINRLSSEGSHHEVLFTFSSMLNSHIPPDAHTYPSLFKACTYLNRFSLGISLHQRVIVEGFSSDSFISSSLINFYAKFCQENNAQKVFDLMPERNVVPWTAMIGCYSSCGDLGRAFWMYNMMRYEGVSPSSVTVLNVLSGVCEVVRLECLQASTIRSGLDSDNHLVNCMLNLYGKCGRVEAARDLFEALGDRDIVSWNSLVSGYAQTGDIEEVLCLLKRMRIEGVSPDKQTFGALLTCSSVLQTDVELGRLIHAQIITGGLEVDAHVATTLVVLYSKYGNVGCAFKIFERVEEKDVILWTSMISACVQNDGGHKALMLFRQMMESGFTPSTAAIATALAACAKVSSRLLGASVHGYLVRQRIKVDIPIQNSLITMYAKCGLLQQSSTIFDDMNERDVVSWNAIVAAYAQDGNLSKALCFLNDMRSMRQRPDSITVVSLLQACASTGALQQGKWIHNFVIKSFSQPSIMVDTALVDMYSKCGDLKTAHRCLLEMPEHDIVSWSTIITCYGSHGMGEMAVKLYSDFLRSGIQPNQVIFLSVLFACSHNGLVAEGLSLFRSMTEEFGIKPELEHRACIVDLLCRAGRLEEAYNFIKTMSSNPRVEILGILLDACRMKGNAKLGEIVARDIMLLKPVYAENYVQLAHSYASMNRWEGVGDAWTQMKALGLRKLPGWSCIQQHGKVTIFFTGQTTHHLYKEMMWVLEILGYHMDDLRFNHNSSELHCILNDI*

Click here to download the sequence:
Link to NCBI Protein BLAST