Transcript Information: S_Transcript_209940.p1


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0645200494072
Replicate 20.6001078759644
Replicate 30.41311728827265
Condition 2: 8 Hour
Replicate 10.75065373916308
Replicate 20.32215462041206
Replicate 30.47747498635158
Condition 3: 24 Hour
Replicate 10.48932539018931
Replicate 20.36262098522156
Replicate 30.80710542096371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209940.p1 GENE.S_Transcript_209940~~S_Transcript_209940.p1 ORF type:complete len:625 (+),score=74.66,MS_channel|PF00924.14|3.7e+03,MS_channel|PF00924.14|7.3e-12 S_Transcript_209940:201-2075(+)
ATGAGGAAGGAAGACACTATCGAGAAATCAGAAAACACATACTCCCATCAAATCAAAATTACTCAAGAAAAGCATGAGTCACATGATGATCAAGAGAATGAGCAAGCCAAAGTGGAAGTAGGATGGCGCAATTGGAAGAAGCGACTTGAACGAGTGCTCTTTTGGTGTGCACTTGCCATCTTCTTCATCGGCATAGCAGCAACCGTGGCATGTGTACAAGTTGCATCCCTCGGAAATCAATCCCTCGGTGGTATAATGTTGTGGCAATGGAGCCTGATTATAACGGCCGTCATAGGAGGGGCCGTTATAAGCCATGCTATACGCCAACTCATCTTGGTTATCATCAACCTCACAAAAGATCGTAACTTAAGAGCCATAGATTTTGTGATGAATTTATTACCTAAAACTTGGGCTGTCTTCTATTTCAGCATTCTACTTATTGCTTGGACTTGGGTGGTCCATACACCAAGCTTTTTCCATCATTCCCATCAAAATATGGGAGGATCAAAGCAAGAGTATTTCCACTTCTTATTGCAAAAGAAATATGCTAATAACATAAGATTAACTCTAATTGCCATCCTTTTGGGAGCCAGCCTTGGTCTAATTAAAGATTGGCTTATTGCAAGGAATAGAAGGCACTTTCATGTAATGAGGTTCAAAGATAGAATTATAGACTCATTGAGAGAAGAATATTGGATCATTTTACTTACCCAAAGGCCCCCTATTATTGAGGATGTCATTTTCAAGTTTCGAGGGATGGAAAATGTTTGTGGATCTACTACAGAAATTCCTTGGTCAAGCTCAGATTTGGAACGTAAACTTCATAATTTGTCTGATTTTGAGATGCGGATTGTGGTTAACGACATTATTAAGGGCAGACCAATGAAGTATATAAATGAAAGAAATGAATTGGTTGAGATTCATGGTGAAAGGGAAGCCAAAAAAGCTGCTGGAATCATCTTCTCCAGGTTGATTGAAGCTGCTGGAGCTCAACATCACAGTAGCCACCCTCAAATTGACGACGACGACGTACTTCAAAAGGCACTTGATAATTTGGTCCCTAAGCACGCGCATAATAAGGTGAAAAATTGGTTGCGTGGGGGAGACCATTCACCAACCTTAAGGAAGAAAACTATCAGAAAATGCTTGATAAGGGCCGTATATAAACGTGAAACACTAAGAGGTGTGTTACAAAGTAACAAAAAGATTTTCCAACAACTGGACAGGATGGTGAATGTGGCACTAGTGGTTGTGATCTTCGTAGTTTGGCTTGTGTTGCTCAAAGACGAGTTCAGAAAAGCCATGCCCGTCATCGGTGGTTTCCTTGCGGGTTCAGCATTCATAACAGGAGAGTTTCTCATGGACCTGCTAAGTAGTATTTCCTTCGTTTTTTGGGCGCATCCTTTTGATGTTGGTGACTGTTGTCTAATTGAAGGCACTCCGGTGACCATTGAAGAAATAGAGCTCCTTCAAACAGTTGCGGTTACATTGAACGATGAAAGGAGGTACTATCCAAATTCCTCATTAGCCAAGTTATCTATGATCAGTAACTACACAAGGAGCCATGACCATATGGGCGACTCTGTGGCTTTCTACCTCGATGCTAGAGCAAAGGAAGACCAAATCAAGGAACTTAAATCCAAAATTAAAAGTTACATAAGGGAAAATTGCCAGCTCTGGCAAAGAGAGCACCAGTTGGTGTTGGAGCTTGATGAACAAGAAAAAAAGAACATTGTGAAGGCGACTCTGCATTTTAAACACACCATCAACTACCATGACTTCAGAGAAAGAGAGGAACGAAAGAATGGCCTTATTTTAGAGCTCACGAAATTTCTTGAGGATTCAAAACTAATGCGGGCTGCACCTCAGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209940.p1 GENE.S_Transcript_209940~~S_Transcript_209940.p1 ORF type:complete len:625 (+),score=74.66,MS_channel|PF00924.14|3.7e+03,MS_channel|PF00924.14|7.3e-12 S_Transcript_209940:201-2075(+)
MRKEDTIEKSENTYSHQIKITQEKHESHDDQENEQAKVEVGWRNWKKRLERVLFWCALAIFFIGIAATVACVQVASLGNQSLGGIMLWQWSLIITAVIGGAVISHAIRQLILVIINLTKDRNLRAIDFVMNLLPKTWAVFYFSILLIAWTWVVHTPSFFHHSHQNMGGSKQEYFHFLLQKKYANNIRLTLIAILLGASLGLIKDWLIARNRRHFHVMRFKDRIIDSLREEYWIILLTQRPPIIEDVIFKFRGMENVCGSTTEIPWSSSDLERKLHNLSDFEMRIVVNDIIKGRPMKYINERNELVEIHGEREAKKAAGIIFSRLIEAAGAQHHSSHPQIDDDDVLQKALDNLVPKHAHNKVKNWLRGGDHSPTLRKKTIRKCLIRAVYKRETLRGVLQSNKKIFQQLDRMVNVALVVVIFVVWLVLLKDEFRKAMPVIGGFLAGSAFITGEFLMDLLSSISFVFWAHPFDVGDCCLIEGTPVTIEEIELLQTVAVTLNDERRYYPNSSLAKLSMISNYTRSHDHMGDSVAFYLDARAKEDQIKELKSKIKSYIRENCQLWQREHQLVLELDEQEKKNIVKATLHFKHTINYHDFREREERKNGLILELTKFLEDSKLMRAAPQG*

Click here to download the sequence:
Link to NCBI Protein BLAST