Transcript Information: S_Transcript_209941.p1


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2368221727888
Replicate 21.2728532437028
Replicate 31.0048926712218
Condition 2: 8 Hour
Replicate 11.4695381148024
Replicate 20.93216035998861
Replicate 31.4005604996863
Condition 3: 24 Hour
Replicate 11.5403443486957
Replicate 21.162246747505
Replicate 31.8188974330613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209941.p1 GENE.S_Transcript_209941~~S_Transcript_209941.p1 ORF type:complete len:624 (+),score=65.60,MS_channel|PF00924.14|3.2e-11 S_Transcript_209941:178-2049(+)
ATGAGGGGGAAGGAAGACACTATCGAGAAATCAGAAAACACATACTCCCATCAAATCAAAATTACTCAAGAAAAGCATGAGTCACATGATGATGAAGAGAATGAACAAGCCAAAGTGGACGTAGGATGGCGCAATTGGAGGAAGCGACTAGAACGAGTGCTCTTTTGGTGTGCACTTGCCATCTTCTTCATCGGCATAGCAGCAACCGTGGCATGTGTACAAGTTGCATCCCTCGGAAATCAATCCCTCGGTGGTATAATGTTATGGCAATGGAGCCTGCTTATAACGGCCATCATAGGAGGGGCTGTTATAAGCCATGCTATACGCCAACTCATCTTGGTTATCATCAACCTCACAAAAGATCGTAACTTAAGAGCCATAGATTTTGTGATGAATTTATTACCTAAAACTTGGGCTGTCTTCTATTTCAGCATTCTACTTATTGCTTGGACTTGGGTGGTCCATACACCAAGCTTTTTCCATCATTCCCATCAAAATATGGGAGGATCAAAGCAAGAGTATTTCCACTTCTTATTGCAAAAGAAATATGCTAATAACATAAGATTAACTCTAATTGCCATCCTTTTGGGAGCCAGCCTTGGTCTAATTAAAGATTGGCTTATTGCAAGGAATAGAAGGCAATTTCATGTAATGAGGTTCAAAGAAAGAATTATAGACTCATTGACAGAAGAATATTGGATCGTTTTACTTACCCAAAGGCCCCCTATTATTGAGGATGTCATTTTCAAGTTTCGAGGGATGGAAAATGTTTGTGGATCTACTACAGAAATTCGTTGGTCAAGCTCAGATTTGGAACATAAACTTCATAAGTTGTATGATTTTGAGATGCGGATTGTAGTTAACGACATTCTTGCGGGGAGACCAATTAAGTATATAAATGAAAGAAATGAATTGGTTGAGATTCATGGTGAAAGGGAAGCCAAAAAAGCTGCTGGAATCATCTTCTCCAGGTTGATTGAAGCTGCTGGACCTCAACATCACAGTAGCTACCCTCACATTGACGACGACGTACTTGAAAAGGCACTTGATAATTTGCTCCCTAAGCACGCGCATAAGGTGAACCATTGGTTGCGTGGGGGAGTCCATTCACCAACCTTAAGGAAGAAAACTATCAGAAAATGCTTGATAAGGGCCGTATATAAACGTGAAACACTAAGAGGTGTGTTACAAAGTAACAAAAAGATTTTCCAACAACTGGACAGGATGGTGAATGTGGCACTAGTGGTTGTGATCTTCGTAGTTTGGCTTGTGTTGCTCAAAGACGAGTTCAGAAAAGCCATGCCCGTCATCGGTGGTTTCCTTGTGGGTTCAGGCTTCATAACAGGAGAGTTTCTCAAGAACCTACTAAGTAGTATTTCCTTCGTTTTTTGGGCGCATCCTTTTGATGTTGGTGACTGTTGTCTAATTGAACGCACTCCGGTGACCATTGAAGCAATAGAGCTCCTTCAAACAGTCGCGGTTACATTGGACGATGAAAGGAGGTACTATCCAAATTCCTCATTAGCCAAGTTATCTATGATTAGTAACTACACAAGGAGTCCTGACGATATGGGCGACTCTGTGGCTTTCTACCTCGATGCTAGAGCAAAGGAAGACCAAATCAAGGAACTTAAATCCAAAATTAAAAGTTACATAAGGGAAAATTGCCAGCTCTGGCAAAGAGAGCACCAGTTGGTGTTGGAGCTTGATGAACAAGAAAAAAAGAACATTGTGAAGGCGACTCTGCATTTTAAACACACCATCAACTACCATGACTTCAGAGAAAGAGAGGAACGAAAGAATGGCCTTATTTTAGAGCTCACGAAATTTCTTGAGGATTCAAAACTAATGCGGGCTGCACCTCAGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209941.p1 GENE.S_Transcript_209941~~S_Transcript_209941.p1 ORF type:complete len:624 (+),score=65.60,MS_channel|PF00924.14|3.2e-11 S_Transcript_209941:178-2049(+)
MRGKEDTIEKSENTYSHQIKITQEKHESHDDEENEQAKVDVGWRNWRKRLERVLFWCALAIFFIGIAATVACVQVASLGNQSLGGIMLWQWSLLITAIIGGAVISHAIRQLILVIINLTKDRNLRAIDFVMNLLPKTWAVFYFSILLIAWTWVVHTPSFFHHSHQNMGGSKQEYFHFLLQKKYANNIRLTLIAILLGASLGLIKDWLIARNRRQFHVMRFKERIIDSLTEEYWIVLLTQRPPIIEDVIFKFRGMENVCGSTTEIRWSSSDLEHKLHKLYDFEMRIVVNDILAGRPIKYINERNELVEIHGEREAKKAAGIIFSRLIEAAGPQHHSSYPHIDDDVLEKALDNLLPKHAHKVNHWLRGGVHSPTLRKKTIRKCLIRAVYKRETLRGVLQSNKKIFQQLDRMVNVALVVVIFVVWLVLLKDEFRKAMPVIGGFLVGSGFITGEFLKNLLSSISFVFWAHPFDVGDCCLIERTPVTIEAIELLQTVAVTLDDERRYYPNSSLAKLSMISNYTRSPDDMGDSVAFYLDARAKEDQIKELKSKIKSYIRENCQLWQREHQLVLELDEQEKKNIVKATLHFKHTINYHDFREREERKNGLILELTKFLEDSKLMRAAPQG*

Click here to download the sequence:
Link to NCBI Protein BLAST