Transcript Information: S_Transcript_209998.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value6.1E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6405023162184
Replicate 20.78795676991124
Replicate 31.3173382916857
Condition 2: 8 Hour
Replicate 11.4784409253475
Replicate 21.5509895065357
Replicate 32.3734031997143
Condition 3: 24 Hour
Replicate 10.32124828662638
Replicate 20.85703489154255
Replicate 30.58286237070646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_209998.p1 GENE.S_Transcript_209998~~S_Transcript_209998.p1 ORF type:complete len:476 (+),score=52.81,Pec_lyase_C|PF00544.15|3.1e-21 S_Transcript_209998:249-1676(+)
ATGCTCCAAAGGACCTGCATTGTCCAGATTTTGGTTTTGTGCTCTGTTTTTTCACTCTCCACTGCGTTTGTCAACCTTACTCTTCCTGGCCAACACCCTGACCCCGATGCCGTTGCTTGGGACGTCCACAGCAAGGTGAACGTTTCAATAACCAGAAGACACCTTCTACAAGCTGATCAGGAGAACCAAATCTCAGATTGCCTCACCGGTAATCCCGTAGACGATTGCTGGCGGTGTGACCCGGAATGGTACAAAGACCGGCAAAGGCTGGCCGATTGTGGCATTGGGTTTGGGCAGTATGCTCTTGGTGGCAAAGGCGGACAATTTTACGTAGTCACTGACTCTTCCGATAATGACGCTGTAAATCCACGTCCTGGTACTCTTCGTTATGCTGTCATTCAAACTGAACCCCTTTGGATCGTCTTCTCCTCCAACATGGTTATCCATCTTTCACAGGAACTAATTTTCAATAGTTACAAAACAGTAGATGGTCGAGGAGCCAATATTCACATAACTGGAGGGGGTTGCATAACCTTACAATACATAAGTAACGTAATAATCCACAACATCCACATCCACCATTGTTATAGTTCAGGCAACACCATGGTCCGGTCCAGCCCAACCCATTATGGATATCGAACCAAGTCAGATGGTGATGGGATTTCCATATTTGGGGCTAAGGACATTTGGATTGATCACTGTTCTTTGTCACATTGTAATGATGGGCTTATTGACATGGTTATGGGCTCAACTGCAATTACTGTGTCCAACAGCCACTTCTCCCACCATAACGAGGTCATGTTATTGGGCCACAGTGACTCATATGAGCCTGATTCTGGCATGCAAGTCACCATTGCTTTCAACCATTTTGGGCCTAAGTTAATCCAGAGGATGCCAAGATGCAGGAAAGGGTATGTGCATGTTGTTAACAATGACTTTACTCAATGGGAGATGTATGCTATTGGAGGCAGTGGGAATCCTACCATTAATAGCCAAGGCAATCGCTACATTGCTCCTTTTGACCGTAACGCCAAAGAGGTGACAAAGAGGGTGGACTCAGACGAGAAGGACTGGAGGGGATGGAACTGGAGATCAGATGGGGACATAATGGTAAATGGAGCATATTTTGTGGCATCAGGTGAAGGAGTTGAAGTCAGATATGAGAAGGCATCAAGTGTGGAGCCCAAATCTGCTGCTTACATCGACCAACTCGTCATGAACGCCGGTGTTTTCGGCGAAAGGAGAAATAATATGGGCCGATGGACCGAAGGACCAGGAGCGAAAAATGACTTGAATGATTATGATTATGGTGATGATTATGGTGGAAGTACACCATCAGTCTCTTCTCAAGCTTCCTTCATTCTTTTCTTGCTAGCTTTATCATTTCTATTTTTGTACATCACCCCTAACATCAATCTTCTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_209998.p1 GENE.S_Transcript_209998~~S_Transcript_209998.p1 ORF type:complete len:476 (+),score=52.81,Pec_lyase_C|PF00544.15|3.1e-21 S_Transcript_209998:249-1676(+)
MLQRTCIVQILVLCSVFSLSTAFVNLTLPGQHPDPDAVAWDVHSKVNVSITRRHLLQADQENQISDCLTGNPVDDCWRCDPEWYKDRQRLADCGIGFGQYALGGKGGQFYVVTDSSDNDAVNPRPGTLRYAVIQTEPLWIVFSSNMVIHLSQELIFNSYKTVDGRGANIHITGGGCITLQYISNVIIHNIHIHHCYSSGNTMVRSSPTHYGYRTKSDGDGISIFGAKDIWIDHCSLSHCNDGLIDMVMGSTAITVSNSHFSHHNEVMLLGHSDSYEPDSGMQVTIAFNHFGPKLIQRMPRCRKGYVHVVNNDFTQWEMYAIGGSGNPTINSQGNRYIAPFDRNAKEVTKRVDSDEKDWRGWNWRSDGDIMVNGAYFVASGEGVEVRYEKASSVEPKSAAYIDQLVMNAGVFGERRNNMGRWTEGPGAKNDLNDYDYGDDYGGSTPSVSSQASFILFLLALSFLFLYITPNINLLC*

Click here to download the sequence:
Link to NCBI Protein BLAST