Transcript Information: S_Transcript_210541.p1


Annotated TAIR IDAT5G07310.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2305684-2306660 | Forward length=263
E-Value4.9E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1046906173094
Replicate 21.914883621973
Replicate 31.3919046100831
Condition 2: 8 Hour
Replicate 11.0461512231046
Replicate 21.435175195756
Replicate 32.0109290193379
Condition 3: 24 Hour
Replicate 12.0608380651504
Replicate 21.1118096245001
Replicate 30.38071010422817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_210541.p1 GENE.S_Transcript_210541~~S_Transcript_210541.p1 ORF type:3prime_partial len:265 (+),score=59.33,AP2|PF00847.16|1.6e-13,AP2|PF00847.16|1e+04 S_Transcript_210541:361-1152(+)
ATGTCTGCCATGGTCTCAGCCCTTTCCCAAGTCATTGGCAATACCAACAACGTTGTCAACCCACCACTTGATAATCAACAACAAGTTTTGCATGCAAACCAACCAGCTCCAAATCACTACTTTCAATATTCACAACCACAAGAGCCTAATCAAGGTGTAGAGAATGCAAGGAAAAGACACTATAGAGGGGTAAGACAAAGGCCATGGGGAAAGTGGGCAGCTGAGATACGAGATCCAAAGAAAGCTGCTCGAGTTTGGCTTGGGACTTTCGAAACAGCTGAAGCTGCTGCCCTTGCTTACGATGAAGCTGCCCTTCGTTTCAAAGGCAACAAAGCTAAGCTAAATTTCCCTGAAAGAGTTCAAGGCAAACTTAGTGACTCAGGTTTCTACATACCTCCCAATTCCCTTCAACAACAACAACAACAAGTTCATTTTCAGGCAGCTACTTATCCTGATTACAACAACAATTACATGATGCCTTCTTCAACTATGCCGCACCAATATCCATCCTTATCTCATAATCATTCTCAAACAACGTCGTTTCAATGGCCGCAACCACCCAACTTCAATTCTCATGAACATGATCAACAATACATCAATTTCTCTCATAGTAGTTCTATTCCGGATTCATCAGCTTCGTATTGCGGAGACCAGAGTTTTGCTTCTATTAAAGTAGAAGCTGTTGATCCTGAGGAGCAAGAAGAAGAAGAAGAAGGAGGAAGAGGAGGAAGAAGAAGAAGAAGGAGGAAGAAGAATGATGTTTTTAAGTTCATCTTATGGAAGAGGTTCTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_210541.p1 GENE.S_Transcript_210541~~S_Transcript_210541.p1 ORF type:3prime_partial len:265 (+),score=59.33,AP2|PF00847.16|1.6e-13,AP2|PF00847.16|1e+04 S_Transcript_210541:361-1152(+)
MSAMVSALSQVIGNTNNVVNPPLDNQQQVLHANQPAPNHYFQYSQPQEPNQGVENARKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGNKAKLNFPERVQGKLSDSGFYIPPNSLQQQQQQVHFQAATYPDYNNNYMMPSSTMPHQYPSLSHNHSQTTSFQWPQPPNFNSHEHDQQYINFSHSSSIPDSSASYCGDQSFASIKVEAVDPEEQEEEEEGGRGGRRRRRRKKNDVFKFILWKRFL

Click here to download the sequence:
Link to NCBI Protein BLAST