Transcript Information: S_Transcript_21065.p1


Annotated TAIR IDAT3G12590.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3996473-4003657 | Reverse length=1184
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2654192237913
Replicate 26.0045550810067
Replicate 36.3732284048969
Condition 2: 8 Hour
Replicate 16.2238829394676
Replicate 25.6280120570843
Replicate 36.5455109476353
Condition 3: 24 Hour
Replicate 16.414612161965
Replicate 25.3768219048631
Replicate 35.3063387960629


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21065.p1 GENE.S_Transcript_21065~~S_Transcript_21065.p1 ORF type:5prime_partial len:1117 (+),score=233.61 S_Transcript_21065:3-3353(+)
GTGATTTTAGAACATACTCTTGCAGAGAAAGAGCGCAGCCCTGCAGTTGTTGGAAGGTGTGTGGCACTCTTAAAGCGTTATTTGTTAAGATATAAACCCAGTGAAGAGACACTGCTGCAGATTGATAGATTTTGTGTACATATCATTGCTGAATGCGATATTGGCCTGAACCGAAAATTGTTGCCTTGGTCACATTCCTTCGGCCAACAATCTAATGCTTCTGCAAATGCACCCCCAAATAGTTCTACCCCGTTGCCTGTTTCTAGCTTTGCTTCTGGGGCACTTATCAAGTCACTAAATTATGTTCGATCTTTGGTCGCCCAGCATATTCCGAGGCGGTCGTTTCAACCTGCCGCTTTTGCGGGAGGCCCTTTTGCATCAAGACAGTTCCTTCCTTCATTGTCATCCTTATTGAGTAGGTCTTTTAACTCTCAATTGAGTCCTGCAAATAGTGGGGAGTCACCAGGAAGGAAAGATGTTAACTTATCTGTGCCAAGTCAAAGAAAGACTGAAAGTATTGATGGAACTGAGGACATAGAGTATATTAGTTATGATGTTTTGAAATGGCGCTGGGCGACTGATCAACTGTCCAAAGCTACTTTAGTTGATTGTGATCATAATTTGAATGCCGAAGACTTAAGCAGACCTAGTTTGCTTGAAGTGGGTGCAGCTTCTCTATTGGTTGCTGACATGGATGCTAAAAAAGGCCAGCCATGGAAGCATTTTGGTACTGCTAATATGCCTTACCTTGATCAACTGTTGCAGCCTTCCTCAATGTCATCAGGCACTAACTGTGCCTCTGCTCGGCACCACTTGAGAATTATAACAGCATCAAAACGAACCAAATCGGGGTCCCAACAGATATGGGAGGATTGTTCAGTGAGCACATTCCGTCCACGGGCTCGGCCACTGTTCCAATACCGTCATTACAGTGAGCAGCAGCCCTTGAAATTGAATCCTACCGAGGTGGGTGAGGTTATAGCAGCTGTTTGCTCGGACACATCCCTGCCAAATGCAAATGTAATGACAATTTCAACTGGTTTGAGCAACCACCGCGCAAAGCCATCAATTGATGTGGCTGTCAGTGTCCTTATCAAACTTGTTATTGACATGTATGTTTTAGATTCTGAATCTGCTGCTCCACTTACTCTGTCTATGCTAGAGGATATGGTTAGTTCCTCAAGATTGTCTTCTAGGACTCGTGCCTTTGACTTGATTTTGAACCTTGCTGTTCATGCTCACCTGTTGGAGCCTGTCATGCCTGATGATGTTTCAACCATTGAAGAAGATTATTCCGTAGAATCATCCTTTGACAATGAGGCGCAACTTGGGACTCAAAGAAATAGAACAAATTCTTACAAGAAGACAGGCGATTCCTCAGCAATTGATAATTTTGAGTCCTGGATTCTGAACATTCTCTATGAGATTCTCATTCTCCTTGTTCAGATTGAAGAGAAAGAAGAATCTGTGTGGGCGTCTGCTTTAAGTTGTTTACTTTATTTCGTCTGTGATAGAGGCAGAATAAGGAGGAGTCGACTGAAAGGCCTTGATATAAGGGTTATGAAGGCATTGATAGAAATCAGTAGGTTGAGTTCATGGGCTGAAGCTGTCCATTCAAAGCTCATTTCAATGTTAGCAAGAATGTTTTATGAACTTGCTGATGAACATGATACCGCTATTTTAAGCACCCCCAAGTTTCTTGCGGAGCAGGTTGATTTGATTGGTGGAATTGATTTTATCTTCCTTGAGTATTCACTCTCTAAAACACAGGAGGAAAGGAGAAATTTGTACTCGTTGCTTCTTGACTACGTCTTACATCAAATTAGTGTAGCAAATATTGCTACTGGAGTTCCGGAGTATGGGATGGACGAGATTCAACCCCTTGCAACTTTGCTTTCTCTTGCTAATGCTGCTGAAGCCTTTCACATTTCTGTTAAGCTAGGGGTTGAAGGCATTGGGGAGATCTTGAGAAGATCTGTATCTTCTGCGTTGTCCAGATATTCTGACAGTGAACAACTGAACATTATCCTTGAGAAGATCACCAGCAAGTTCGATTCAATTATAAGTTCATTTACTCATTTAGAGAAAGAGTTTTCCAATATGAGACAGATCACCAAATCATGTAAACTTCTGAAAAGCGTTGAGGATGGGGCCATAGGAAGGGGTATTAGTAGGAAAGCTAAATTATCATGGGCCACTCTGCATTCGCTTCTTCATTCAGACAGAGTAGCCTGCCGCAAGAATGGGTACATCTGGTTGGGTGATCTTTTGATTTCTGAAATCAGTGAGGAGAGGGGTGGAAATGTGTTGTCCAATATCAGCAGCTTGAAGCAGCAAATAGCTTTAGCTGGTTTCAAAGATCCTTCTGCTCTCCCAGATATTCCACTGTCCATCTGGCTTATGTGTGGCTTGCTGAAGTCAAAGAACAGTGCAATCAGAGCGGGCTTCCTTTTTGTTTTGGAAGTTCTTCTAATGCGATGCAAGTTTCTTTTGGATGAGAGTAAGACAGAGCATTCAGCAAGCAGCACTTCTGAGCCTTATGGCGATCGTTGTCTGGTAAAAGCAAATTCAGTGATAGATATCATGAACAGTTGCTTGTCACTGGTAGCTGAAATAAATGAGACAGATCACTTCAACATTCTGAAGATGTGCGACATCCTGTTCTCCCAACTCTGCCTTAAAGTTCCTCCAGCATCTGTGACGACAACTGGAGATGCAGGTCAAACTAGTAGAGGTTCAAGTAGCATGGATCCAAATAACAAGGTAGATATAGGCGAATGTATTCCCCTTGAAGAGAATATTCAACGAAGAGGACTGGAGGATGTTGATAACTTCTTTAGTTCACTGGTTTGTGAGACTTCATCAGTCGCGGCTTTGCTTCTTCAAGGAAGAGCTGTTGTTCCTCTGCAGTTGGTTGCACGTGTTCCAGCTGTGTTATTTTATTGGCCACTGATTCAACTTGCTGGCGCAGCCACAGACAATATTGCTTTGGGAGTTTCTGTTGGCAGCAAAGGAAGGGGAAACCTACCAGGTGCGACTTCAGACATTCGTGCTGCCCTTCTTTTGCTTCTAATTGCTAAATGCACAGCAGACCCTACTGCTTTTGAGGATGTTGATGGAGAAGATTTTTTCAGTCAACTTCTAGATGATCCAGACTCTAGAGTGGCTTATTACTCTGCAGCGTTCCTTTTGAAGAGAATGATGACGGCGGATTTTGACAATTACCAACGTAGGCTTCAGAAACTCGTTCTCAAAGCCCAGCAGAGTAATAATGAAAAGCTGTTGGAAAACCCATATCTACAAATGCGAGGGATACTTCAGTTGTCAAATGATCTTGGAAGTGGGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21065.p1 GENE.S_Transcript_21065~~S_Transcript_21065.p1 ORF type:5prime_partial len:1117 (+),score=233.61 S_Transcript_21065:3-3353(+)
VILEHTLAEKERSPAVVGRCVALLKRYLLRYKPSEETLLQIDRFCVHIIAECDIGLNRKLLPWSHSFGQQSNASANAPPNSSTPLPVSSFASGALIKSLNYVRSLVAQHIPRRSFQPAAFAGGPFASRQFLPSLSSLLSRSFNSQLSPANSGESPGRKDVNLSVPSQRKTESIDGTEDIEYISYDVLKWRWATDQLSKATLVDCDHNLNAEDLSRPSLLEVGAASLLVADMDAKKGQPWKHFGTANMPYLDQLLQPSSMSSGTNCASARHHLRIITASKRTKSGSQQIWEDCSVSTFRPRARPLFQYRHYSEQQPLKLNPTEVGEVIAAVCSDTSLPNANVMTISTGLSNHRAKPSIDVAVSVLIKLVIDMYVLDSESAAPLTLSMLEDMVSSSRLSSRTRAFDLILNLAVHAHLLEPVMPDDVSTIEEDYSVESSFDNEAQLGTQRNRTNSYKKTGDSSAIDNFESWILNILYEILILLVQIEEKEESVWASALSCLLYFVCDRGRIRRSRLKGLDIRVMKALIEISRLSSWAEAVHSKLISMLARMFYELADEHDTAILSTPKFLAEQVDLIGGIDFIFLEYSLSKTQEERRNLYSLLLDYVLHQISVANIATGVPEYGMDEIQPLATLLSLANAAEAFHISVKLGVEGIGEILRRSVSSALSRYSDSEQLNIILEKITSKFDSIISSFTHLEKEFSNMRQITKSCKLLKSVEDGAIGRGISRKAKLSWATLHSLLHSDRVACRKNGYIWLGDLLISEISEERGGNVLSNISSLKQQIALAGFKDPSALPDIPLSIWLMCGLLKSKNSAIRAGFLFVLEVLLMRCKFLLDESKTEHSASSTSEPYGDRCLVKANSVIDIMNSCLSLVAEINETDHFNILKMCDILFSQLCLKVPPASVTTTGDAGQTSRGSSSMDPNNKVDIGECIPLEENIQRRGLEDVDNFFSSLVCETSSVAALLLQGRAVVPLQLVARVPAVLFYWPLIQLAGAATDNIALGVSVGSKGRGNLPGATSDIRAALLLLLIAKCTADPTAFEDVDGEDFFSQLLDDPDSRVAYYSAAFLLKRMMTADFDNYQRRLQKLVLKAQQSNNEKLLENPYLQMRGILQLSNDLGSGL*

Click here to download the sequence:
Link to NCBI Protein BLAST